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The map label for this gene is ygbA [H]

Identifier: 16766166

GI number: 16766166

Start: 3005842

End: 3006186

Strand: Reverse

Name: ygbA [H]

Synonym: STM2860

Alternate gene names: 16766166

Gene position: 3006186-3005842 (Counterclockwise)

Preceding gene: 16766171

Following gene: 16766159

Centisome position: 61.89

GC content: 53.91

Gene sequence:

>345_bases
ATGCCTGGTAAACGTATCGCTCGTGAAAAACTGACGATCAAAAAAATGATCGCGCTGTATGAAAGCCAGTGCCCACAGGC
GTCAACGGTGCAGGGGCATTACGACGCGCTGTTCGCCTACGCGCAAAAACGTCTTGATAAATGCGTATTTGGCGAGGAAA
AACCCGCCTGTAAGCAGTGCCCGGTGCACTGCTATCAGCCGGCTAAACGCGAGGAGATGAAGCAGATTATGCGTTGGGCA
GGTCCGCGAATGCTTTGGCGGCATCCTGTCCTGACCGTGCGGCACCTTATCGACGATAAGCGCCCCGTTCCGGAATTGCC
GGAAAAATATCAGCGCAAGAAGTGA

Upstream 100 bases:

>100_bases
AAAATAATTCTTATTTGCGAAATGGCGACAATATGCAGTGATAGTGCTAAAGAGGGATAAGGTGTAAAATAAATACACCT
TAATGTTCGGAGAGAGCACG

Downstream 100 bases:

>100_bases
AGGGGAAGCGCCAGGCCTACGGCGCGCATCATCTCCAGGCCGGATCAGATCCGGCAACCCGTTACGCTAACGCGTCTTTA
TCAATACCCAATCGCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPGKRIAREKLTIKKMIALYESQCPQASTVQGHYDALFAYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWA
GPRMLWRHPVLTVRHLIDDKRPVPELPEKYQRKK

Sequences:

>Translated_114_residues
MPGKRIAREKLTIKKMIALYESQCPQASTVQGHYDALFAYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWA
GPRMLWRHPVLTVRHLIDDKRPVPELPEKYQRKK
>Mature_113_residues
PGKRIAREKLTIKKMIALYESQCPQASTVQGHYDALFAYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAG
PRMLWRHPVLTVRHLIDDKRPVPELPEKYQRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=114, Percent_Identity=86.8421052631579, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 13478; Mature: 13347

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKRIAREKLTIKKMIALYESQCPQASTVQGHYDALFAYAQKRLDKCVFGEEKPACKQC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
PVHCYQPAKREEMKQIMRWAGPRMLWRHPVLTVRHLIDDKRPVPELPEKYQRKK
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
PGKRIAREKLTIKKMIALYESQCPQASTVQGHYDALFAYAQKRLDKCVFGEEKPACKQC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
PVHCYQPAKREEMKQIMRWAGPRMLWRHPVLTVRHLIDDKRPVPELPEKYQRKK
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]