Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is ybhN [H]
Identifier: 16764174
GI number: 16764174
Start: 876150
End: 877112
Strand: Reverse
Name: ybhN [H]
Synonym: STM0811
Alternate gene names: 16764174
Gene position: 877112-876150 (Counterclockwise)
Preceding gene: 16764175
Following gene: 16764164
Centisome position: 18.06
GC content: 54.83
Gene sequence:
>963_bases ATGGCTAAATCGCATCCGCGCTGGCGGCTGGCTAAAAAAGTGCTGACCTGGCTGTTTTTTATTGCGGTCGTCGTTCTGCT GGTGGTTTATGCTAAAAAGGTCGACTGGGGCGATGTCTGGACCGTCATCCGTGACTATAACCGCACGGCGCTTTTAAGCG CTGTGGGACTGGTGATCGTTAGCTATCTTCTGTACGGCTGCTACGACCTGCTTGGACGGCTTTATTGCGGCCATAAACTG GCGAAGCGACAGGTGATGTTGGTATCGTTCGTCTGCTATGCCTTTAACCTGACGCTCAGCACCTGGGTCGGCGGGATCGG GATGCGTTACCGACTATACTCTCGCCTCGGGTTGCCCGGCAGTACTATCACGCGCATTTTCTCACTCAGCATTACCACTA ACTGGCTGGGCTATATTCTGCTTGGCGGCATCATTTTTACCTTCGGCATTGTCCAGCTTCCCGACCACTGGTATATCGAT GCAGGCACGCTACGAATTCTCGGTATCGTTTTATTGTTGATTATCGCGGTCTATCTGTGGTTTTGCGCCTTTGCGAAGCG GCGGCATATGACGATTAAAGGACAGAAACTGGTGCTGCCGTCATGGAAATTCGCGCTGGCGCAGATGGCGATCTCCAGCG CGAACTGGATGGCGATGGGCGCCATCATCTGGCTGCTGATGGGTCAGGATGTGAACTATTTCTTTGTGCTGGGCGTACTG CTGGTGAGCAGTATCGCGGGCGTCATCGTGCATATTCCGGCAGGCATCGGCGTGCTGGAGGCCGTATTCCTTGCGTTGCT GGCGGGCGAACATACGTCGCAAGGCACGATTATCGCCGCCCTGCTCGCATACCGCGTGCTTTACTATTTTATTCCCCTGT TGCTGGCGCTGGTGTGCTATCTGATCCTGGAGAGCCGGGCGAAGAAGCTGCGGGCGAAAAACGAGCGGGCGATGGCGAAA TAA
Upstream 100 bases:
>100_bases CGGCGCATACCCCGCATCTGGCGCAGGTTCCCCCGCCTGCCCAGCCAGAAATGGAAACCCAGGATCGCGTTGATCCAGAA AATACAGGAGTGAAGCCCTA
Downstream 100 bases:
>100_bases ATTTAAGCAGACGCGTTTTCGCTTTCCAGCACAACGCGTTTTATCCGGTAAAAATAAACATATGCTGAGAAAAAAGACGT ATTCATCTGTAAGCGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIRDYNRTALLSAVGLVIVSYLLYGCYDLLGRLYCGHKL AKRQVMLVSFVCYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYID AGTLRILGIVLLLIIAVYLWFCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMAMGAIIWLLMGQDVNYFFVLGVL LVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGTIIAALLAYRVLYYFIPLLLALVCYLILESRAKKLRAKNERAMAK
Sequences:
>Translated_320_residues MAKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIRDYNRTALLSAVGLVIVSYLLYGCYDLLGRLYCGHKL AKRQVMLVSFVCYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYID AGTLRILGIVLLLIIAVYLWFCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMAMGAIIWLLMGQDVNYFFVLGVL LVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGTIIAALLAYRVLYYFIPLLLALVCYLILESRAKKLRAKNERAMAK >Mature_319_residues AKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIRDYNRTALLSAVGLVIVSYLLYGCYDLLGRLYCGHKLA KRQVMLVSFVCYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYIDA GTLRILGIVLLLIIAVYLWFCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMAMGAIIWLLMGQDVNYFFVLGVLL VSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGTIIAALLAYRVLYYFIPLLLALVCYLILESRAKKLRAKNERAMAK
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 slr0712 [H]
Homologues:
Organism=Escherichia coli, GI1787006, Length=318, Percent_Identity=89.622641509434, Blast_Score=560, Evalue=1e-161,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 35935; Mature: 35804
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIRDYNRTALLSAVGLVIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH SYLLYGCYDLLGRLYCGHKLAKRQVMLVSFVCYAFNLTLSTWVGGIGMRYRLYSRLGLPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH STITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYIDAGTLRILGIVLLLIIAVYLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHH FCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMAMGAIIWLLMGQDVNYFFVLGVL HHHHHHHCCCEECCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH LVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGTIIAALLAYRVLYYFIPLLLALVCY HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LILESRAKKLRAKNERAMAK HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKSHPRWRLAKKVLTWLFFIAVVVLLVVYAKKVDWGDVWTVIRDYNRTALLSAVGLVIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH SYLLYGCYDLLGRLYCGHKLAKRQVMLVSFVCYAFNLTLSTWVGGIGMRYRLYSRLGLPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH STITRIFSLSITTNWLGYILLGGIIFTFGIVQLPDHWYIDAGTLRILGIVLLLIIAVYLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHH FCAFAKRRHMTIKGQKLVLPSWKFALAQMAISSANWMAMGAIIWLLMGQDVNYFFVLGVL HHHHHHHCCCEECCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH LVSSIAGVIVHIPAGIGVLEAVFLALLAGEHTSQGTIIAALLAYRVLYYFIPLLLALVCY HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LILESRAKKLRAKNERAMAK HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]