Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is ybhA [H]
Identifier: 16764148
GI number: 16764148
Start: 848199
End: 849017
Strand: Reverse
Name: ybhA [H]
Synonym: STM0784
Alternate gene names: 16764148
Gene position: 849017-848199 (Counterclockwise)
Preceding gene: 16764150
Following gene: 16764143
Centisome position: 17.48
GC content: 53.24
Gene sequence:
>819_bases ATGACTGCACGCGTGATTGCCCTCGATTTAGACGGAACATTATTAACCCCGCATAAAACCTTACTCCCCTCCTCGCTTGA AGCGCTATCACGCGCCAAAGAGGCGGGCTTTCAACTTATCATTGTCACTGGTCGCCATCACGTTGCTATTCATCCTTTTT ATCAGGCGCTGGCGCTGGAAACACCTGCTATTTGCTGCAACGGCACCTATTTGTATGATTATCAAGCTAAAACTGTCCTG GATGCCGATCCTATGCCCGTGGATAAGGCGTTGCAGTTGATTGATTTACTGGATGAGCATCAGATTCACGGCCTGATGTA TGTTGATGACGCTATGCTTTACGAACACCCAACCGGCCACGTCGTGCGTACCTCCCGGTGGGCGCAGACCTTGCCGCCGG AACAACGTCCGACCTTTACACAGGTCTCTTCGTTAGCGCAGGCGGCGCGCGACGTGAATGCCGTGTGGAAGTTTGCGCTT ACCGATGAAGATATTCCCAGACTACAGCGGTTCGGTCAGCATGTTGAACAGGCGCTTGGCCTGGAGTGCGAATGGTCATG GCACGATCAGGTGGATATCGCGCGCAAAGGCAACAGTAAAGGCAAGCGCCTTACCCAGTGGATAGAAGCGCAGGGAGGGT CAATGAAAAATGTGATCGCTTTCGGCGATAACTACAACGACATCAGTATGCTGGAGGCGGCAGGCACCGGCGTTGCGATG GGCAACGCCGATGAGGCGGTGAAAGCGCGCGCTGACGTTGTGATCGGCGATAACACTACCGATAGCATCGCCAAATTTAT TTACACCCACCTGCTATAG
Upstream 100 bases:
>100_bases TGACGGCGAATGCTGAATTCAGACGCAGAATTTTGTCTGCTTACCGTCCCGGTGTACCATGCCGACAGACGGAGTTATTA CTCTTAATCTGGAAAAAATT
Downstream 100 bases:
>100_bases TCAGGCGGTGATAGAAACGCTTTTCACCTGCGCGTAAAGCCACAGGCCAGGCTTGATATTCAGCTCATCCCTGGCCCACG GGCTTATTCGCGCCCACAGC
Product: phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVL DADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFAL TDEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM GNADEAVKARADVVIGDNTTDSIAKFIYTHLL
Sequences:
>Translated_272_residues MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVL DADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFAL TDEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM GNADEAVKARADVVIGDNTTDSIAKFIYTHLL >Mature_271_residues TARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVLD ADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALT DEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAMG NADEAVKARADVVIGDNTTDSIAKFIYTHLL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=84.1911764705882, Blast_Score=496, Evalue=1e-142, Organism=Escherichia coli, GI1787043, Length=262, Percent_Identity=25.1908396946565, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001757 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 30120; Mature: 29988
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALE CCEEEEEEECCCEEECCCHHHCHHHHHHHHHHHHCCEEEEEEECCCEEEECHHHHHHHHC TPAICCNGTYLYDYQAKTVLDADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGH CCCEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHEEECCCCC VVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALTDEDIPRLQRFGQHVEQALG EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHC LECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM CCEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEE GNADEAVKARADVVIGDNTTDSIAKFIYTHLL CCCHHHHHHHEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure TARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALE CEEEEEEECCCEEECCCHHHCHHHHHHHHHHHHCCEEEEEEECCCEEEECHHHHHHHHC TPAICCNGTYLYDYQAKTVLDADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGH CCCEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHEEECCCCC VVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALTDEDIPRLQRFGQHVEQALG EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHC LECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM CCEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEE GNADEAVKARADVVIGDNTTDSIAKFIYTHLL CCCHHHHHHHEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665460; 8564363; 8905232; 9278503 [H]