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The map label for this gene is ybfA [H]

Identifier: 16764078

GI number: 16764078

Start: 774461

End: 774667

Strand: Direct

Name: ybfA [H]

Synonym: STM0708

Alternate gene names: 16764078

Gene position: 774461-774667 (Clockwise)

Preceding gene: 16764068

Following gene: 16764079

Centisome position: 15.94

GC content: 50.72

Gene sequence:

>207_bases
ATGGAACACTATAAAGACTATCCAGCGCATGTCATTTTTGTCCGTCGTGCTTTCGCGGTGATCGCAGGCGTGCTGGCGCT
GCCGGTGATGCTCTTCTGGAAAGACCGCGCGCGTTTTTATAGTTATCTGCACCGTGTCTGGTCGAAAACCAGTGATAAAC
CGGTATGGATGGCGCAGGCTGAAAAAGCCACCTGCGACTTTTATTAA

Upstream 100 bases:

>100_bases
GGTACTATTTTAATCAGGTAACGAGGTTCAATTTTTCGGTGCTATTCACCGATTCAATCTATACCGGGGCGGGTAGCGTC
GGTATAAAGGGGGGAAACGT

Downstream 100 bases:

>100_bases
TCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTTTTATGCGCCAGGGTCTACACTGTTTAACGCTATT
CGCCGTGACGTTTCATCTTT

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MEHYKDYPAHVIFVRRAFAVIAGVLALPVMLFWKDRARFYSYLHRVWSKTSDKPVWMAQAEKATCDFY

Sequences:

>Translated_68_residues
MEHYKDYPAHVIFVRRAFAVIAGVLALPVMLFWKDRARFYSYLHRVWSKTSDKPVWMAQAEKATCDFY
>Mature_68_residues
MEHYKDYPAHVIFVRRAFAVIAGVLALPVMLFWKDRARFYSYLHRVWSKTSDKPVWMAQAEKATCDFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786916, Length=68, Percent_Identity=82.3529411764706, Blast_Score=118, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019663 [H]

Pfam domain/function: PF10725 DUF2517 [H]

EC number: NA

Molecular weight: Translated: 8130; Mature: 8130

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYKDYPAHVIFVRRAFAVIAGVLALPVMLFWKDRARFYSYLHRVWSKTSDKPVWMAQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
EKATCDFY
CCCCCCCC
>Mature Secondary Structure
MEHYKDYPAHVIFVRRAFAVIAGVLALPVMLFWKDRARFYSYLHRVWSKTSDKPVWMAQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
EKATCDFY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]