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The map label for this gene is ybeM [H]

Identifier: 16764008

GI number: 16764008

Start: 693656

End: 694444

Strand: Direct

Name: ybeM [H]

Synonym: STM0631

Alternate gene names: 16764008

Gene position: 693656-694444 (Clockwise)

Preceding gene: 16764006

Following gene: 16764009

Centisome position: 14.28

GC content: 56.4

Gene sequence:

>789_bases
ATGTTCGTTGCAGCCGGGCAGTTTGTGGTGAGTTCTGTATGGGAAGAGAATGCGCAAGTTTGCGTTTCGTTAATGGCTCA
GGCGGCGGGCCGCGGCGTATCGCTTCTGGTGTTGCCTGAGGGGATATTAGCGCGAGATGACATCGACCTTGACCTGCCGA
TTCGCGCCGCGCAGCCGCTGGATGGCGCGTTTATGACGCGGCTTCTGGAAGAAAGCGCTCATAATAATATGACGACGATA
TTCACTATCCTTGTCCCGTCAACGCCTGGACGGGCGGTTAATATGCTGGTGGCGCTACGGGCGGGTCACATTGTCGCGCG
TTACGCGAAGCTGCATCTCTATGATGCGTTTTCGATGCAAGAATCCCAAAGTATTGATGCCGGAACCGTTATCGCGCCTG
TGCTGGACGTGGAGGGGGTTAAGGTGGGGCTTATGACCTGTTATGACCTGCGCTTTCCGGACATGGCGCTAGCGCTGGCT
TTACAGGGGGCTGACGTATTGGCGCTGCCGACGGGCTGGGTTCGCGGCCCGTTGAAAGAGCAGCAGTGGTCGACGCTGCT
GGCGGCGAGAGCGCTGGATACCACCAGCTATATGATTGCGGCCGGGGAGTGTGGTAATCGTAATATTGGTCAAAGTCGTA
TTATCGATCCGTTGGGGGTAACGATAGCCGCGGCAGCCGATCGTCCGGCGCTGATCGTCGCGGAAATATTCAGAGAACGA
ATAGACCAGGTGCGGGAGCAACTTCCTCTTTTGCAGCAACGACGATTTGCGCCACCGCAATTATTATGA

Upstream 100 bases:

>100_bases
GCTGTAACACTGCCGAATCCTTTATTTAATTGCTATACAAGAGGAGTGTAACGCCGAACACGCATAATTGGCGAGTCCTG
ACAGAGGTGTGGGAGGGGAT

Downstream 100 bases:

>100_bases
TGTTTTTTTACGCAAAGCTTGATTCACCTTGTTACAGATTGCTATTGTGTGCGCGCGTCGAAAGACCGTTAATATTCTCA
GGTTAATCCGGCGCGTTACG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFVAAGQFVVSSVWEENAQVCVSLMAQAAGRGVSLLVLPEGILARDDIDLDLPIRAAQPLDGAFMTRLLEESAHNNMTTI
FTILVPSTPGRAVNMLVALRAGHIVARYAKLHLYDAFSMQESQSIDAGTVIAPVLDVEGVKVGLMTCYDLRFPDMALALA
LQGADVLALPTGWVRGPLKEQQWSTLLAARALDTTSYMIAAGECGNRNIGQSRIIDPLGVTIAAAADRPALIVAEIFRER
IDQVREQLPLLQQRRFAPPQLL

Sequences:

>Translated_262_residues
MFVAAGQFVVSSVWEENAQVCVSLMAQAAGRGVSLLVLPEGILARDDIDLDLPIRAAQPLDGAFMTRLLEESAHNNMTTI
FTILVPSTPGRAVNMLVALRAGHIVARYAKLHLYDAFSMQESQSIDAGTVIAPVLDVEGVKVGLMTCYDLRFPDMALALA
LQGADVLALPTGWVRGPLKEQQWSTLLAARALDTTSYMIAAGECGNRNIGQSRIIDPLGVTIAAAADRPALIVAEIFRER
IDQVREQLPLLQQRRFAPPQLL
>Mature_262_residues
MFVAAGQFVVSSVWEENAQVCVSLMAQAAGRGVSLLVLPEGILARDDIDLDLPIRAAQPLDGAFMTRLLEESAHNNMTTI
FTILVPSTPGRAVNMLVALRAGHIVARYAKLHLYDAFSMQESQSIDAGTVIAPVLDVEGVKVGLMTCYDLRFPDMALALA
LQGADVLALPTGWVRGPLKEQQWSTLLAARALDTTSYMIAAGECGNRNIGQSRIIDPLGVTIAAAADRPALIVAEIFRER
IDQVREQLPLLQQRRFAPPQLL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI5031947, Length=278, Percent_Identity=32.0143884892086, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI297632348, Length=278, Percent_Identity=32.0143884892086, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI297632350, Length=278, Percent_Identity=32.0143884892086, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI9910460, Length=262, Percent_Identity=25.1908396946565, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17556280, Length=273, Percent_Identity=28.9377289377289, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322335, Length=306, Percent_Identity=27.4509803921569, Blast_Score=102, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6323383, Length=167, Percent_Identity=31.7365269461078, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355835, Length=167, Percent_Identity=28.1437125748503, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17933642, Length=269, Percent_Identity=26.3940520446097, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 28372; Mature: 28372

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVAAGQFVVSSVWEENAQVCVSLMAQAAGRGVSLLVLPEGILARDDIDLDLPIRAAQPL
CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCCC
DGAFMTRLLEESAHNNMTTIFTILVPSTPGRAVNMLVALRAGHIVARYAKLHLYDAFSMQ
CHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHCCC
ESQSIDAGTVIAPVLDVEGVKVGLMTCYDLRFPDMALALALQGADVLALPTGWVRGPLKE
CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHEECCCCEEEECCCHHCCCCCH
QQWSTLLAARALDTTSYMIAAGECGNRNIGQSRIIDPLGVTIAAAADRPALIVAEIFRER
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHH
IDQVREQLPLLQQRRFAPPQLL
HHHHHHHCCHHHHHCCCCCCCC
>Mature Secondary Structure
MFVAAGQFVVSSVWEENAQVCVSLMAQAAGRGVSLLVLPEGILARDDIDLDLPIRAAQPL
CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCCC
DGAFMTRLLEESAHNNMTTIFTILVPSTPGRAVNMLVALRAGHIVARYAKLHLYDAFSMQ
CHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHCCC
ESQSIDAGTVIAPVLDVEGVKVGLMTCYDLRFPDMALALALQGADVLALPTGWVRGPLKE
CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHEECCCCEEEECCCHHCCCCCH
QQWSTLLAARALDTTSYMIAAGECGNRNIGQSRIIDPLGVTIAAAADRPALIVAEIFRER
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHH
IDQVREQLPLLQQRRFAPPQLL
HHHHHHHCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]