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The map label for this gene is ybbN [H]

Identifier: 16763884

GI number: 16763884

Start: 564015

End: 564869

Strand: Reverse

Name: ybbN [H]

Synonym: STM0504

Alternate gene names: 16763884

Gene position: 564869-564015 (Counterclockwise)

Preceding gene: 16763885

Following gene: 16763881

Centisome position: 11.63

GC content: 55.56

Gene sequence:

>855_bases
ATGTCCGTACAGAACATTGTCAATATTAATGAATCCAACCTGCAGCAGACCTTAGAGCAGTCCATGACCACGCCGGTACT
GTTCTATTTCTGGTCTGAACGCAGCCAACACTGTCTGCAATTAACGCCAGTGCTGGAAAGCCTGGCTGCCCAGTACCACG
GTCAGTTTATTCTGGCAAAGCTGGACTGCGACGCCGAACAGATGATCGCCGCTCAGTTTGGGCTGCGCGCCATCCCGACA
GTCTATCTGTTCCAGAATGGCCAACCGGTCGATGGTTTCCAGGGACCGCAGCCGGAAGAGGCGATCCGCGCTCTGCTGGA
TAAAGTACTGCCGCGCGAAGAAGAGCTAAAGGCGCAACAAGCGATGCAGTTAATGCAGGAGGGCAACTACATTGACGCGC
TGCCGTTGCTCAAAGACGCCTGGCAGCTCTCTTCGCAGAACAGTGAGATTGGCCTGTTACTGGCGGAAGCGCAAATTGCG
CTGAACCGCTCTGAAGAGGCCGAAGCGGTGTTAAAAACTATCCCGCTACAGGATCAGGATACCCGTTATCAGGGGCTGGT
TGCGCAGATCGAACTGCTTAAACAGGCGGCGGATACGCCGGAAATTCAGCAACTTCAGCAGCAAGTCGCGGACAATCCGC
AGGATGCGGCTTTGGCAACGCAACTGGCATTGCAGTTGCACCAGGTCGGACGTAATGAAGAAGCGCTGGAATTGCTGTTC
AGCCATCTGAGAAAAGATCTTACCGCCGCCGAGGGACAGACGCGCAAAACCTTCCAGGAGATCCTTGCCGCGCTCGGCAC
CGGCGACGCGCTGGCGTCGAAATACCGCCGCCAGTTGTACGCGCTACTGTATTAA

Upstream 100 bases:

>100_bases
TATTGCCGGGCCGGATGCTGGATAAAATTTTACAAAGCTGAGTTGAAGCGCGCCCGTCAGCCCCCATGTAAACGTGACAC
AGACAAAAGAGAGCGACGCC

Downstream 100 bases:

>100_bases
TCCTCTCTTGCCTGATGGCGCGCTTATCTGGCCTACCTGTCGTCCTCAGGCCGGATAAGGCGCTTGCGCCATCATCCGGC
AACTATCATGATTTCTTGAG

Product: thioredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAAQFGLRAIPT
VYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIA
LNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLF
SHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY

Sequences:

>Translated_284_residues
MSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAAQFGLRAIPT
VYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIA
LNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLF
SHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
>Mature_283_residues
SVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAAQFGLRAIPTV
YLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIAL
NRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFS
HLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=94.7183098591549, Blast_Score=542, Evalue=1e-156,
Organism=Escherichia coli, GI1788936, Length=105, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31815; Mature: 31683

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAK
CCCCHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ
ECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQD
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCC
TRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
SHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
HHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAK
CCCHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ
ECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQD
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCC
TRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
SHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
HHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]