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The map label for this gene is yajC [H]

Identifier: 16763786

GI number: 16763786

Start: 461971

End: 462303

Strand: Direct

Name: yajC [H]

Synonym: STM0406

Alternate gene names: 16763786

Gene position: 461971-462303 (Clockwise)

Preceding gene: 16763785

Following gene: 16763787

Centisome position: 9.51

GC content: 51.95

Gene sequence:

>333_bases
ATGAGCTTTTTTATTTCTGATGCGGTAGCGGCAACAGGTGCTCCAGCGCAGGGCAGCCCGATGTCTCTGATTTTAATGCT
GGTGGTGTTTGGTCTGATTTTCTATTTCATGATCCTGCGCCCGCAGCAGAAGCGCACCAAAGAGCACAAAAAGCTGATGG
ACTCCATTGCGAAAGGTGATGAAGTTCTGACGAATGGCGGTCTGGTCGGTCGAGTGACCAAAGTAGCGGAAGCCGGCTAC
ATTGCCATCGCGCTGAATGACACCACGGAAGTGGTTATCAAACGTGACTTCGTAGCTGCCGTTCTGCCGAAAGGCACCAT
GAAGGCGCTGTAA

Upstream 100 bases:

>100_bases
GAGGGTAAATTAGAGAGCTTCGTAACCGAGTTTTACCAACGTCAGGGGCGACCCGTTCCACCTTTGAACGTTGATTAATT
TTAATAATGAGGGAATTTGA

Downstream 100 bases:

>100_bases
TATTTCGTTTTCCCAAAGGGAACTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGGTCGTCGTGATTAT
CGTCGGCCTGCTTTACGCAC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAEAGY
IAIALNDTTEVVIKRDFVAAVLPKGTMKAL

Sequences:

>Translated_110_residues
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAEAGY
IAIALNDTTEVVIKRDFVAAVLPKGTMKAL
>Mature_109_residues
SFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAEAGYI
AIALNDTTEVVIKRDFVAAVLPKGTMKAL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=99.0909090909091, Blast_Score=219, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11844; Mature: 11713

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD
CCEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
EVLTNGGLVGRVTKVAEAGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
CEEECCCCHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD
CEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
EVLTNGGLVGRVTKVAEAGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
CEEECCCCHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]