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The map label for this gene is yclN [H]

Identifier: 218931014

GI number: 218931014

Start: 4538666

End: 4539625

Strand: Direct

Name: yclN [H]

Synonym: YPO4023

Alternate gene names: 218931014

Gene position: 4538666-4539625 (Clockwise)

Preceding gene: 218931013

Following gene: 218931015

Centisome position: 97.53

GC content: 49.9

Gene sequence:

>960_bases
ATGAAAAATTTAAGCTTTGTCGCAGGCCTGGTGATCCTACTGGGCCTGATGATATGCAGCCTATTCATCGGGGCCGGGCA
TGTTACGTTCGCTAATCTCTGGTCGGATCCCGATATGCGCGACATCTTCTTCATCAGTCGTGTGCCGCGAACGCTGGCAT
TGGTTCTGGCTGGCAGTGCCATGAGCGTTTCCGGGCTGATTATGCAGATGCTGACACAGAATCGCTTCGTTGAGCCCTCG
ATTGCTGGTACCACACAATCGGCCAGTCTTGGCTTATTGTTGGTGATGGTTTTCAGTCCATCAGCCTCGGTGATGATCAA
GATGCTAGTGGCCACGTTATTCGCGATGGGTGGCACCGTCCTGTTCATGATGTTATTGGCACGCATGAGAATGAAATCTG
CGCTGATGGTGCCACTGACCGGCATTATGTTAGGGGCAGTTTTTAGTGCCGTAACCACATTCCTGGCGATGGAATTCGAC
CTATTACAGTCGTTAGGCAGTTGGGAGTCCGGTGATTTTTCTGGTGTATTACAGGGCCGCTATGAATTGCTGTGGATTGT
GGGCGTCCTGACGCTGGTAGCGTGTTTTATCGCTGACCGCTTCACGGTTGCGGGTATGGGCCGGGATTTCTCGGTCAATG
TCGGCTTGAATTATCAAAGAGTTATGTTGATTGGGATGTCCATCATTGCCATCATCAGTGGCGTCGTGGTAGTCGTGATT
GGTGTGCTGCCTTTTCTTGGTTTGATTATCCCTAATATTGTTAGTATGGCGATGGGCGATAATCTGCGCCGAACCATACC
TTGGGTTGGCCTTTGTGGTGGCGGCTTGGTTGTATTATGCGACATTATTGGCCGATTAATCAGTTACCCTTTTGAAATCC
CTGCCAGTGTTATTCTGGGCGTTATTGGCGCACTCGTTTTCCTGTTATTAATTGTTAGGACAAAACGTCATGCGGGCTGA

Upstream 100 bases:

>100_bases
CTCACTCTATATTGCCGGGGGTGTGCAAAGTTATACACAACTGATGAATAAGGTGAGCGCAATACTGGATAAGCCAGTAT
CAGAGCAGTAACTTTCATCC

Downstream 100 bases:

>100_bases
GGAGTACTCTGCAAAAAACACGCTATTCCAAGGCATAAATAAAGCGTTAACTTTGCCAGCAAAGCGGTTATTGCTACTGA
GCATCATCGCTCTCGGTGCG

Product: putative iron transport permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGRDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG

Sequences:

>Translated_319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGRDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG
>Mature_319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGRDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=314, Percent_Identity=27.7070063694268, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=26.5232974910394, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786347, Length=288, Percent_Identity=28.125, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788004, Length=291, Percent_Identity=28.5223367697594, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786805, Length=278, Percent_Identity=27.6978417266187, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34147; Mature: 34147

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
MSVSGLIMQMLTQNRFVEPSIAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFDLLQSLGSWESGDFSGVLQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YELLWIVGVLTLVACFIADRFTVAGMGRDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILG
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH
VIGALVFLLLIVRTKRHAG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
MSVSGLIMQMLTQNRFVEPSIAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFDLLQSLGSWESGDFSGVLQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YELLWIVGVLTLVACFIADRFTVAGMGRDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILG
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH
VIGALVFLLLIVRTKRHAG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]