| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yclQ [H]
Identifier: 218931013
GI number: 218931013
Start: 4537703
End: 4538656
Strand: Direct
Name: yclQ [H]
Synonym: YPO4022
Alternate gene names: 218931013
Gene position: 4537703-4538656 (Clockwise)
Preceding gene: 218931012
Following gene: 218931014
Centisome position: 97.51
GC content: 47.69
Gene sequence:
>954_bases ATGCGATTACGTTTAGCTTTATTTTCGTCATTACTGGCGGCAACCTTTGCGATAACAGGCTGTGATCAATCGTCAGAAAC CCCTGACAATGCAGCAACAATCAGTATTGAACATGCACAGGGAACAACGCTGGTTCCGCTAAACCCACAAAAAGTCGTCA TACTGAACCCATCAGTGCTGGATAACGCTGACGCCCTACACATCAAGGTAGCCGGTGTTCCACAGACCAGCACACATCTA CCAGCCTTTTTATCTAAGTACAGCGGCCCTGAGTATATGAATACCGGGACACTGTTTGAACCCGATTATGAAGCACTCAG TCAGGCTAAACCTGACCTGATCATCGCGGGTGGGCGTGCTCAAGATGCTTATAACAAACTCAGTGCTATCGCTCCAACTA TCGCGCTTGATGTTGATACTCAGCACTTTACCCAGAGCCTTACCCAGCGTACTGAGCAACTGGCCTCAATATTTGGCAAA GAAGAAGAAGCCAAAACACTGCTTGGTAATTTCTCATCACAGGTAAACGCGATAAAGCAGAAATCGGCTAACGCTGGCTC GGCAATGGTATTGATGATCAGCGGTGGAAAAATGTCGGCTTACACCCCCGGTTCCCGTTTTGGTTTTATTTTTGACGAAC TGGGATTCACACCTGCGGCCACCTTTGCTGAATCAGGCCGCCACGGAAATGTGGTGACATCAGAATTCATTCTTAATGCT AATCCTGACTGGCTGTTCGTCCTTGACCGCGACAATGCGATTGGCCGGACTGAAGGGCAATCCGCACAACAGGTCCTCGA TAACCCGCTGATCCATAAAACTAAAGCATGGCAAAACGATCGCATTGTTTATCTCGATTCTGCCTCACTCTATATTGCCG GGGGTGTGCAAAGTTATACACAACTGATGAATAAGGTGAGCGCAATACTGGATAAGCCAGTATCAGAGCAGTAA
Upstream 100 bases:
>100_bases TGTTCATCACAAGCATTGATAGGTATCATCTTGGGATTGGTAATAAAAATCATTAGCATTACTGATGCTGATTTCTGCAT TCCACTTCTCAGGAGAGAAA
Downstream 100 bases:
>100_bases CTTTCATCCATGAAAAATTTAAGCTTTGTCGCAGGCCTGGTGATCCTACTGGGCCTGATGATATGCAGCCTATTCATCGG GGCCGGGCATGTTACGTTCG
Product: putative iron transport protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHIKVAGVPQTSTHL PAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGK EEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRHGNVVTSEFILNA NPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSAILDKPVSEQ
Sequences:
>Translated_317_residues MRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHIKVAGVPQTSTHL PAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGK EEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRHGNVVTSEFILNA NPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSAILDKPVSEQ >Mature_317_residues MRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHIKVAGVPQTSTHL PAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGK EEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRHGNVVTSEFILNA NPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSAILDKPVSEQ
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG4607
COG function: function code P; ABC-type enterochelin transport system, periplasmic component
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786807, Length=227, Percent_Identity=26.431718061674, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 34128; Mature: 34128
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVL CEEHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCC DNADALHIKVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRA CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEECCCHHHHHCCCCCEEEECCCC QDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGKEEEAKTLLGNFSSQVNAIKQ HHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRHGNVVTSEFILNA HCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEC NPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYT CCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHH QLMNKVSAILDKPVSEQ HHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVL CEEHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCC DNADALHIKVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRA CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEECCCHHHHHCCCCCEEEECCCC QDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGKEEEAKTLLGNFSSQVNAIKQ HHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRHGNVVTSEFILNA HCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEC NPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYT CCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHH QLMNKVSAILDKPVSEQ HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 10658653 [H]