| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is argC
Identifier: 218930925
GI number: 218930925
Start: 4411401
End: 4412405
Strand: Reverse
Name: argC
Synonym: YPO3927
Alternate gene names: 218930925
Gene position: 4412405-4411401 (Counterclockwise)
Preceding gene: 218930930
Following gene: 218930924
Centisome position: 94.81
GC content: 50.45
Gene sequence:
>1005_bases ATGTTAAATACGTTGATTGTTGGTGCCAGTGGCTATGCCGGCGCGGAGCTTACGGCTTACCTTAATCGTCACCCACATAT GAACATAACCGGTTTAGCGGTTTCAGCGCAAAGTGCAGATGCAGGAAAATTACTTTCCGATCTGCATCCACAGTTAAAAG GCATTCTTGACCTCCCGCTACAGCCCTTGGTAGATGTGGCTCAGGCGGCTAAAGGTATCGATGTGGTTTTCCTCGCTACC GCTCATGAGGTCAGCCATGATTTGGCACCACAATTTTTAGCCGCTGGCTGTGTGGTATTTGATCTTTCCGGTGCATTCCG TGTGCGTGATGCGGCGTTTTACAGCCAATATTACGGTTTTGAACACCAACATCCCGATTGGCTCGATAAGGCGGTTTATG GCCTGGCAGAATGGCAATCAGAAGACATTAAGCAAGCTCAATTGATTGCTGTTCCTGGTTGTTATCCAACCGCATCACAA CTGGCGCTTAAACCGTTGGTTGATGGGCAATTACTGAACGATGCACAGTGGCCAGTCATTAATGCCGTCAGTGGTGTCAG CGGTGCAGGGCGTAAAGCCAGCATGGGCAACAGCTTCTGTGAAGTTAGCTTGCAGCCATATGGCCTATTTACCCACCGTC ACCAGCCAGAAATTGTTACCCATCTTGGCACCCCCGTCATTTTTACACCGCATCTGGGGAATTTTGCCCGAGGGATCTTG GCGACGATTACCTGCCGCCTGAAAGCTGGGGTCACGGCGCAAAACATCGCCGATGCCTATCACCATGCTTATCAGAATAA GCCACTGGTGCGGTTGTATCAACAAGGTGTCCCGGCGCTGAAAGCCGTGGTCGGCCTACCTTTCTGTGATATTGGTTTCT CGGTACAAGGCGAGCATTTAATTATTGTTGCCACCGAAGATAACCTGCTGAAAGGTGCTGCGGCTCAGGCCGTACAATGT ATGAATATCCGTTTTGGCTTCCCGGAAACGCAGTCCCTGTTGTAG
Upstream 100 bases:
>100_bases CCTTGCTGAGAACCCGAATACCAGTTTTGACTATTTATGTTTTTATATGCATAGGCTTTTATTGACATAAATAAAAATAC TCAGAAGGTGAACTGAACCC
Downstream 100 bases:
>100_bases CGTTCGGTTGCAAGCAATAGATTGTAAGTGATTGATTGTAATTAATGGATTGCAAGAAATAGATTGCAGTAAACAGATTG TGAGCCATAAATTGTGAGCA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPLQPLVDVAQAAKGIDVVFLAT AHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGFEHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQ LALKPLVDGQLLNDAQWPVINAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGIL ATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHLIIVATEDNLLKGAAAQAVQC MNIRFGFPETQSLL
Sequences:
>Translated_334_residues MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPLQPLVDVAQAAKGIDVVFLAT AHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGFEHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQ LALKPLVDGQLLNDAQWPVINAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGIL ATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHLIIVATEDNLLKGAAAQAVQC MNIRFGFPETQSLL >Mature_334_residues MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPLQPLVDVAQAAKGIDVVFLAT AHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGFEHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQ LALKPLVDGQLLNDAQWPVINAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGIL ATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHLIIVATEDNLLKGAAAQAVQC MNIRFGFPETQSLL
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=334, Percent_Identity=78.1437125748503, Blast_Score=543, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6320913, Length=333, Percent_Identity=30.03003003003, Blast_Score=115, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_YERPE (Q8ZA86)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AC0478 - RefSeq: NP_667650.1 - RefSeq: NP_994416.1 - RefSeq: YP_002348800.1 - ProteinModelPortal: Q8ZA86 - SMR: Q8ZA86 - GeneID: 1145257 - GeneID: 1176768 - GeneID: 2763912 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO3927 - KEGG: ypk:y0310 - KEGG: ypm:YP_3123 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: YPES187410:Y0310-MONOMER - BioCyc: YPES214092:YPO3927-MONOMER - BRENDA: 1.2.1.38 - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 35871; Mature: 35871
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS01224 ARGC; PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 154-154
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPL CCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCHHHHHHHCCCC QPLVDVAQAAKGIDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGF HHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHCCC EHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQLALKPLVDGQLLNDAQWPVI CCCCCHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHH NAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGIL HHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHCCCCEEECCCCCHHHHHHH ATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHL HHHEEHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEECCCCEECCCEE IIVATEDNLLKGAAAQAVQCMNIRFGFPETQSLL EEEECCCCHHHHHHHHHHHHEEEEECCCCHHHCC >Mature Secondary Structure MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPL CCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCHHHHHHHCCCC QPLVDVAQAAKGIDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGF HHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHCCC EHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQLALKPLVDGQLLNDAQWPVI CCCCCHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHH NAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGIL HHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHCCCCEEECCCCCHHHHHHH ATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHL HHHEEHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCEECCCCEECCCEE IIVATEDNLLKGAAAQAVQCMNIRFGFPETQSLL EEEECCCCHHHHHHHHHHHHEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430