| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930930
Identifier: 218930930
GI number: 218930930
Start: 4419280
End: 4419711
Strand: Reverse
Name: 218930930
Synonym: YPO3934
Alternate gene names: NA
Gene position: 4419711-4419280 (Counterclockwise)
Preceding gene: 218930931
Following gene: 218930925
Centisome position: 94.97
GC content: 38.19
Gene sequence:
>432_bases TTGTTTTTCTCGCGTAGTGACCGTGTTTCACAGGGCACAAACCCGTTTGGCTTCAAGCTATATATTTGTCACCTTAGGCG TTATTGGGTTTTTTTATCTTTTATTGCTACAGGGGTTAATGAAAAAAGCGTATACACTCAGGATAATTTTATAAAATATC ACATGCTTACTGATCGTGATATTGAAAAAACGCCGAAGATTACCCGTGATTATTATTTTGAGTATCAACCAGGGGACGGT TATAACCCATCAAGTACAATAATATTTAATCATACGCTCGATGCTAGCCCTTTAAAAAATTATCTCAACAGTCTTGGGTA TGAACGCCAAAGCCAAATTTTGGTGATAGTGAAGTGTGGTCACTACCAAGCGAAACGACACAATCCACTTTCTATCTCTG GGTGGATAAGGCGCACAATCAAATTCGGTTAA
Upstream 100 bases:
>100_bases TCGAGAATGACAGAGATAAAGATATATTGTTTAGCGTTTACGATGGAATGTATCGCTTAGAGAAAAATGGCAAGATAGTT AAAATGAAACGCGAATAAAA
Downstream 100 bases:
>100_bases CAAAAGAATGACACCGATAAATTTTTTGTACCCTCTCTCTCCTTGTTGACGTCCAAAGCACATTTGAACAGCCGATTGAC GCCAGACCATCATCTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MFFSRSDRVSQGTNPFGFKLYICHLRRYWVFLSFIATGVNEKSVYTQDNFIKYHMLTDRDIEKTPKITRDYYFEYQPGDG YNPSSTIIFNHTLDASPLKNYLNSLGYERQSQILVIVKCGHYQAKRHNPLSISGWIRRTIKFG
Sequences:
>Translated_143_residues MFFSRSDRVSQGTNPFGFKLYICHLRRYWVFLSFIATGVNEKSVYTQDNFIKYHMLTDRDIEKTPKITRDYYFEYQPGDG YNPSSTIIFNHTLDASPLKNYLNSLGYERQSQILVIVKCGHYQAKRHNPLSISGWIRRTIKFG >Mature_143_residues MFFSRSDRVSQGTNPFGFKLYICHLRRYWVFLSFIATGVNEKSVYTQDNFIKYHMLTDRDIEKTPKITRDYYFEYQPGDG YNPSSTIIFNHTLDASPLKNYLNSLGYERQSQILVIVKCGHYQAKRHNPLSISGWIRRTIKFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16879; Mature: 16879
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSRSDRVSQGTNPFGFKLYICHLRRYWVFLSFIATGVNEKSVYTQDNFIKYHMLTDRD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCC IEKTPKITRDYYFEYQPGDGYNPSSTIIFNHTLDASPLKNYLNSLGYERQSQILVIVKCG CCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC HYQAKRHNPLSISGWIRRTIKFG CEECCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MFFSRSDRVSQGTNPFGFKLYICHLRRYWVFLSFIATGVNEKSVYTQDNFIKYHMLTDRD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCC IEKTPKITRDYYFEYQPGDGYNPSSTIIFNHTLDASPLKNYLNSLGYERQSQILVIVKCG CCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC HYQAKRHNPLSISGWIRRTIKFG CEECCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA