Click here to switch to the map view.

The map label for this gene is murI [H]

Identifier: 218930909

GI number: 218930909

Start: 4390216

End: 4391079

Strand: Reverse

Name: murI [H]

Synonym: YPO3909

Alternate gene names: 218930909

Gene position: 4391079-4390216 (Counterclockwise)

Preceding gene: 229220642

Following gene: 218930908

Centisome position: 94.36

GC content: 48.73

Gene sequence:

>864_bases
ATGGCTACCAAACCCCAGGACGCGAATACTACTTCACGGGAAGCTATAACTTCTAAGGCTGACTCTCCTCCTCGCCCGAC
AGCACTGATTTTTGATTCGGGTGTTGGCGGGCTGTCTGTCTATCAAGAGATTCGGCAACTGTTGCCGGATCTCCACTATA
TATATGCTTTTGATAACGTCGCTTTCCCTTATGGGGAAAAGTCCGGCGAATTTATTGTCGAGCGTGTGCTGGAAATTGTG
ACCGCGGTACAGCAGCGCCACCCTTTGGCAATTGTTGTCATCGCGTGTAACACGGCTAGCACTGTCTCTCTGCCTGCGTT
ACGTGAACGCTTCGCCTTCCCTGTTGTCGGCGTGGTCCCAGCGATTAAACCGGCAGTAAGGTTAACGCGTAATGGCGTTG
TGGGTTTACTTGCCACTCGTGCAACCGTCCATGCTTCTTATACCTTAGATTTAATTGCGCGTTTTGCCACTGATTGCAAA
ATAGAGTTGCTGGGTTCATCTGAGCTGGTGGAGGTAGCAGAAACCAAGTTGCATGGTGGAGTTGTACCGCTCGAGGTATT
AAAGAAGATTCTCCACCCATGGTTAAGCATGCGTGAGCCACCGGATACTATAGTATTGGGTTGCACCCATTTCCCTCTAT
TAACAGAAGAGTTAGCGCAAGTGCTACCGGAAGGTACCCGGATGGTCGATTCAGGCGCTGCCATTGCTCGCCGAACGGCT
TGGCTTATCTCTTCTCAAGAGAATGTTATTTCTTCTCAAGATGAAAACATCGCTTACTGCATGGCTTTAGACGAGGATAC
TGACGCTTTATTACCCGTTTTACAGAGTTATGGTTTCCCGAAGCTGCAAAAACTACCAATTTAA

Upstream 100 bases:

>100_bases
GTGAGCCTTTGGGATCTCGCTGTTTCGTATCCGGTCACATCTCATCTCACGGTTCGTGGTAGAATTGCCAACCTGTTTGA
TAAAGATTATGAGATGGTTT

Downstream 100 bases:

>100_bases
GCGCAATTCGTCTAAAGAATCAGCGGTTGAAAAGTTTTTTGAAATTAGGGGTTGCAGGCTGTCAGGAACTCCCTATAATG
CGCCTCCACTGACCGGGAAC

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIV
TAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCK
IELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTA
WLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI

Sequences:

>Translated_287_residues
MATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIV
TAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCK
IELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTA
WLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
>Mature_286_residues
ATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVT
AVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKI
ELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAW
LISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=287, Percent_Identity=71.4285714285714, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 31267; Mature: 31135

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNV
CCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEEEECCE
AFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVP
ECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHH
AIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGG
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC
VVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTA
EEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHH
WLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
HHHCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNV
CCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEEEECCE
AFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVP
ECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHH
AIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGG
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC
VVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTA
EEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHH
WLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
HHHCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA