Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218930821
Identifier: 218930821
GI number: 218930821
Start: 4283525
End: 4283845
Strand: Reverse
Name: 218930821
Synonym: YPO3818
Alternate gene names: NA
Gene position: 4283845-4283525 (Counterclockwise)
Preceding gene: 218930824
Following gene: 218930820
Centisome position: 92.05
GC content: 37.69
Gene sequence:
>321_bases ATGGCGAATGAACAACTGCTTTATCGTATTCAGTTTATAAATAATGGTAAAAATTATCAGCTTTATGTCCGTGAAATCGG TTCTAGCTCGTTATTTGGATTTATTGAAATTGCTGATTTTGTCTTTGATAGCCAATCAACATTGTTAGTTGATCCCTCGA CAGAGAAATTGAAAACTGAATTTTCTGGTGTCAACCGTAGCTATATTCCTCTACATGCGGTCATTCGTATTGATAGTGTC ACCGAGAAAGGTAGCGCCCGGATATCTGAGCTTGGCAACAATGTGATGAATTTCCCCTATTTACCGGGTAATAAACCCTA A
Upstream 100 bases:
>100_bases CACCGGCTCTGCATGCTGATATCTTGGTCTTGTTTGGCTCACATGCTATGTTAACGCCGATTTCCTCTCGTTATAACAAG GAATAGAGACAGGTCACGCT
Downstream 100 bases:
>100_bases GAATATTTAACTGGGGCGCTATGGGTGTCATCTTTTACGGTTTTTACGGTGTCCCTGTCGTATCATTGATGGGGCGGGTA TGCTGAATTTTTGCCATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Conserved In Bacteria
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MANEQLLYRIQFINNGKNYQLYVREIGSSSLFGFIEIADFVFDSQSTLLVDPSTEKLKTEFSGVNRSYIPLHAVIRIDSV TEKGSARISELGNNVMNFPYLPGNKP
Sequences:
>Translated_106_residues MANEQLLYRIQFINNGKNYQLYVREIGSSSLFGFIEIADFVFDSQSTLLVDPSTEKLKTEFSGVNRSYIPLHAVIRIDSV TEKGSARISELGNNVMNFPYLPGNKP >Mature_105_residues ANEQLLYRIQFINNGKNYQLYVREIGSSSLFGFIEIADFVFDSQSTLLVDPSTEKLKTEFSGVNRSYIPLHAVIRIDSVT EKGSARISELGNNVMNFPYLPGNKP
Specific function: Unknown
COG id: COG4517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11965; Mature: 11834
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEQLLYRIQFINNGKNYQLYVREIGSSSLFGFIEIADFVFDSQSTLLVDPSTEKLKTE CCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHEEEHHHCCCCCEEEECCCHHHHHHH FSGVNRSYIPLHAVIRIDSVTEKGSARISELGNNVMNFPYLPGNKP HCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ANEQLLYRIQFINNGKNYQLYVREIGSSSLFGFIEIADFVFDSQSTLLVDPSTEKLKTE CCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHEEEHHHCCCCCEEEECCCHHHHHHH FSGVNRSYIPLHAVIRIDSVTEKGSARISELGNNVMNFPYLPGNKP HCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA