Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930799
Identifier: 218930799
GI number: 218930799
Start: 4263327
End: 4263818
Strand: Direct
Name: 218930799
Synonym: YPO3797
Alternate gene names: NA
Gene position: 4263327-4263818 (Clockwise)
Preceding gene: 218930791
Following gene: 218930800
Centisome position: 91.61
GC content: 41.67
Gene sequence:
>492_bases ATGATGAAGAAAACTGTTATTGCTATTATCACTATGGCCACATTGACCAGCACTGCGGCTTATGCAAACACAATAGAGAA AGATATTCGTGTTGAAGCAGAAATTATTTCTCTCATGGACGTGAAGAGAGCTGATGATAGCAATATTAATAAAATAAAAT TAACCTATGACACGGTAACGAATGATGGTACGTATAGCCATTCAGAAGCAATTAAAGTAAAAGCACGTAAACAACTCGGA GATAAGCTAAAAGTGTCTCTTGCCGCACCGGTTATCTTAAGCGAGCCAAATAACAATAAAGAGTTTACTCACGTTGAAGT ATTGTTAGATGGGAAGAAGCTGCTTGAGACGGCCGACACACGAGACCTGATTGCCTTCCATGGCTCTGAGCTCAACGCAG AACTAAAAGTCAGCGCCAAAGAGCCTAATAATGCCGTCGGTGGTGAAAAGTATAGCGGGGTAATTCAATTGCGCCTGGAG CCAAGCGCTTAA
Upstream 100 bases:
>100_bases AACACCCTCATTTTATATTACGCCACCAACATCAACCCTAATAAATCACAATGCCATTCCATTTTGGATGGGTTTTTACA TAAAGGACTATCAGGTATTT
Downstream 100 bases:
>100_bases TTTAGTTTGTTTCAATACAGTTTGTTAATTTAATGAATACAGCCATGGAATTATCTCCTGGCTGTATATATCTGTCATAC TTCAAGCTGCATGTGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLG DKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLE PSA
Sequences:
>Translated_163_residues MMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLG DKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLE PSA >Mature_163_residues MMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLG DKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLE PSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17828; Mature: 17828
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVT CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC NDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADT CCCCCCCCCEEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCC RDLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA CEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVT CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC NDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADT CCCCCCCCCEEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCC RDLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA CEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA