| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930706
Identifier: 218930706
GI number: 218930706
Start: 4134234
End: 4134710
Strand: Reverse
Name: 218930706
Synonym: YPO3699
Alternate gene names: NA
Gene position: 4134710-4134234 (Counterclockwise)
Preceding gene: 218930707
Following gene: 218930705
Centisome position: 88.85
GC content: 42.77
Gene sequence:
>477_bases ATGAAACTGCGCACTTGGTTATTAATACCGATAATATGCTCACCTTTTTTTTGGGGAAGTACCGCAATAGCCAAAAATGG CGTCGCCATCCCATTACCTGATAAGCGAGTCGCTGTGTTGTCTGAGGGCGATTTAGAATCGGCATCTGTCGGCACCTATT CTGTCGCTATTTTCAAGAATGACACTTTTTTGGACTTTATTGCTGGCGGAGTGTTTTCTCGTGATGGTTCGATATTCCAA GATAATGGAAAACCTCGGGTAGAATTTACTGATATCAATGGTGATGGCAACAAAGAATTGATCGTCTCCCAATTGACTGC TGGATCAGGTAACTATTTGCGGGTTGATGCCTTCAGCCTGGGACCGGATAGTATCAATAAAGTATTGAGTATTCAATCAG ATACCAAAAGTGATTATATATCACTACTGAAAGAACTTTGTGAGATCTGTCTGCCCATCGATGCTCCCCCCCACTGA
Upstream 100 bases:
>100_bases TTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATCAGTTACCGCATTCGTATACTCTGTAGC CTATTGAGAGGGGATTAAGG
Downstream 100 bases:
>100_bases TGGTTCTGCATTCAAATTCAGTTCACCCCCAATAAAACCAAACCACATAATCGATATCACCGCAGTAAAAAATACCCTAA CGGTGAGAAAATTCGTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKLRTWLLIPIICSPFFWGSTAIAKNGVAIPLPDKRVAVLSEGDLESASVGTYSVAIFKNDTFLDFIAGGVFSRDGSIFQ DNGKPRVEFTDINGDGNKELIVSQLTAGSGNYLRVDAFSLGPDSINKVLSIQSDTKSDYISLLKELCEICLPIDAPPH
Sequences:
>Translated_158_residues MKLRTWLLIPIICSPFFWGSTAIAKNGVAIPLPDKRVAVLSEGDLESASVGTYSVAIFKNDTFLDFIAGGVFSRDGSIFQ DNGKPRVEFTDINGDGNKELIVSQLTAGSGNYLRVDAFSLGPDSINKVLSIQSDTKSDYISLLKELCEICLPIDAPPH >Mature_158_residues MKLRTWLLIPIICSPFFWGSTAIAKNGVAIPLPDKRVAVLSEGDLESASVGTYSVAIFKNDTFLDFIAGGVFSRDGSIFQ DNGKPRVEFTDINGDGNKELIVSQLTAGSGNYLRVDAFSLGPDSINKVLSIQSDTKSDYISLLKELCEICLPIDAPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17098; Mature: 17098
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRTWLLIPIICSPFFWGSTAIAKNGVAIPLPDKRVAVLSEGDLESASVGTYSVAIFKN CCCCCEEEEHHHHCCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEEEEC DTFLDFIAGGVFSRDGSIFQDNGKPRVEFTDINGDGNKELIVSQLTAGSGNYLRVDAFSL CCCHHHHHCCEECCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEC GPDSINKVLSIQSDTKSDYISLLKELCEICLPIDAPPH CHHHHHHEEEECCCCHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MKLRTWLLIPIICSPFFWGSTAIAKNGVAIPLPDKRVAVLSEGDLESASVGTYSVAIFKN CCCCCEEEEHHHHCCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEEEEC DTFLDFIAGGVFSRDGSIFQDNGKPRVEFTDINGDGNKELIVSQLTAGSGNYLRVDAFSL CCCHHHHHCCEECCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEC GPDSINKVLSIQSDTKSDYISLLKELCEICLPIDAPPH CHHHHHHEEEECCCCHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA