| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930626
Identifier: 218930626
GI number: 218930626
Start: 4033596
End: 4034390
Strand: Direct
Name: 218930626
Synonym: YPO3616
Alternate gene names: NA
Gene position: 4033596-4034390 (Clockwise)
Preceding gene: 218930625
Following gene: 218930629
Centisome position: 86.67
GC content: 33.46
Gene sequence:
>795_bases ATGTGTACGGCTATAGCTATTTATGGTACTGAGAATATCCCTCCTGAAACTGCATATGAAATAGGTATGCTATTTTTTAA GGTTATAGAACTAGATATAACTTCAACAGGTTACTATAAATATAGGGAAGATAGAAGTGAGGAGGATATTGACTTTATTG AAGTGTCTTTATCTGATTTGAAAAATGAACTTAAAAATAAAAATGCGACTTCTTTTCGATTTTATAATGAAAGTGAAAAA AGCAATTATTGGACTGCCTCATTTGGGTTCTCAACAAGTGATTTTGGTGGTTTTTATCATTTTGATGCTCAATGTGCATT ATCGAAAAATGGAAAAGAGAAATTTATTGAATTTATAAAAGAGTTTAGCAGTAAAAATAACTTCTCTTATGGGATAGTAT ATAATCCTGACAATGTTGCCGATGGTTTTTATTATGCAGAGGGTGGAAACTTTGTTCAGATTTATCAATATGAGAACCCA ATGTTTTTTGAAAAAGAAACCGGGGGAATGTATGAGGGTCAGGAACGCTATAAAAACACTATGCTAAGGATGGTGTACCC GGTTAATGTGATTAATCATCATCATCTTGATATTATTATCGGAAATGTTAGCTTGAAAGAGTGGATATCAAGTGATGAAA AGCATGGTACCCTTGAAGGATTAAATAATGATCTGTGGCTATGGACAGTTGAGGATACTAAACTCGACGAGGTAAATAAG TATCTTGGTGAGGCAGGGGTATTAATATCCTGGAAACCGCCAACAATTAAAAAAGCACCTAGAAAACTGCCATAA
Upstream 100 bases:
>100_bases GCATTGATCGGGGAAGTGTTATTGTATTAGAACACCAATATAATTCTTCGAAGATTAAGAATGCATTAGATAATCTTATT TCTGGTATATAGGTGAAACT
Downstream 100 bases:
>100_bases ATAAAAACCGGGAAGATCCTAAGAAGATCTTCCCGGTTGTTTTTTGATCGCCAGTAGTTACCCAGTTAAGCCCGTTTGTG TGAGCCAGTCTCCCGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MCTAIAIYGTENIPPETAYEIGMLFFKVIELDITSTGYYKYREDRSEEDIDFIEVSLSDLKNELKNKNATSFRFYNESEK SNYWTASFGFSTSDFGGFYHFDAQCALSKNGKEKFIEFIKEFSSKNNFSYGIVYNPDNVADGFYYAEGGNFVQIYQYENP MFFEKETGGMYEGQERYKNTMLRMVYPVNVINHHHLDIIIGNVSLKEWISSDEKHGTLEGLNNDLWLWTVEDTKLDEVNK YLGEAGVLISWKPPTIKKAPRKLP
Sequences:
>Translated_264_residues MCTAIAIYGTENIPPETAYEIGMLFFKVIELDITSTGYYKYREDRSEEDIDFIEVSLSDLKNELKNKNATSFRFYNESEK SNYWTASFGFSTSDFGGFYHFDAQCALSKNGKEKFIEFIKEFSSKNNFSYGIVYNPDNVADGFYYAEGGNFVQIYQYENP MFFEKETGGMYEGQERYKNTMLRMVYPVNVINHHHLDIIIGNVSLKEWISSDEKHGTLEGLNNDLWLWTVEDTKLDEVNK YLGEAGVLISWKPPTIKKAPRKLP >Mature_264_residues MCTAIAIYGTENIPPETAYEIGMLFFKVIELDITSTGYYKYREDRSEEDIDFIEVSLSDLKNELKNKNATSFRFYNESEK SNYWTASFGFSTSDFGGFYHFDAQCALSKNGKEKFIEFIKEFSSKNNFSYGIVYNPDNVADGFYYAEGGNFVQIYQYENP MFFEKETGGMYEGQERYKNTMLRMVYPVNVINHHHLDIIIGNVSLKEWISSDEKHGTLEGLNNDLWLWTVEDTKLDEVNK YLGEAGVLISWKPPTIKKAPRKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30593; Mature: 30593
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTAIAIYGTENIPPETAYEIGMLFFKVIELDITSTGYYKYREDRSEEDIDFIEVSLSDL CCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCCEEEEEHHHH KNELKNKNATSFRFYNESEKSNYWTASFGFSTSDFGGFYHFDAQCALSKNGKEKFIEFIK HHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECEEEECCCCHHHHHHHHH EFSSKNNFSYGIVYNPDNVADGFYYAEGGNFVQIYQYENPMFFEKETGGMYEGQERYKNT HHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHH MLRMVYPVNVINHHHLDIIIGNVSLKEWISSDEKHGTLEGLNNDLWLWTVEDTKLDEVNK HEEEEEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH YLGEAGVLISWKPPTIKKAPRKLP HHCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MCTAIAIYGTENIPPETAYEIGMLFFKVIELDITSTGYYKYREDRSEEDIDFIEVSLSDL CCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCCEEEEEHHHH KNELKNKNATSFRFYNESEKSNYWTASFGFSTSDFGGFYHFDAQCALSKNGKEKFIEFIK HHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECEEEECCCCHHHHHHHHH EFSSKNNFSYGIVYNPDNVADGFYYAEGGNFVQIYQYENPMFFEKETGGMYEGQERYKNT HHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHH MLRMVYPVNVINHHHLDIIIGNVSLKEWISSDEKHGTLEGLNNDLWLWTVEDTKLDEVNK HEEEEEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH YLGEAGVLISWKPPTIKKAPRKLP HHCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA