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The map label for this gene is mmsR [H]

Identifier: 218930629

GI number: 218930629

Start: 4036958

End: 4037899

Strand: Direct

Name: mmsR [H]

Synonym: YPO3619

Alternate gene names: 218930629

Gene position: 4036958-4037899 (Clockwise)

Preceding gene: 218930626

Following gene: 218930633

Centisome position: 86.75

GC content: 46.18

Gene sequence:

>942_bases
TTGGCATGTCACGATGAACCGGGATATAGCCTGAATTTCTGTCATCAACATCGTGTGGGGCGTATGGAAAAAAACATGCA
ACGAACGCAGGTCGTGGCGAACTGGTATCGAGAGTCGGATGAGTTTTCGACGTTGGTGAACTACCGGATTCTGCGTGCGG
GTCATATTCGTGCAGCCGATAATTTTCATGTACGCCGTCAGTCTGTTGCCGGTCACGAATTGATTTTTTGTCTCAATGGT
AGTGGATTTATCCGCCTGGAAAATAATCTTCATGAAGTTAAAAAGGGTAATCTCGCTTGGTTGCCTGTCCGTTGGCCCCA
TGAACATTTTCCAAATAAACAAGAACCCTGGGAGATTTTATGGTTACGCATTGATGGCGCTAAACTCAACAATATCATGC
AGATCCTTGATGTTGCCCAACAACCGGTTTTTGAATTCACCTCCCCTGAAACCATCACCGATATTTATCACCGCCTATTT
GATTTAATGCAGAGTCATACCCTCGTGGCGGATGCCCATTGCGATGTGCTGTGTTCCCAACTGATATACACCCTGCTGGA
GAATCGCAGTTTCGATGCCACGAAATCGCCGGTCATTTCCCATCGTGGGCTGGGTCGGCTGATTTATCAGATTCATAGCC
ATTACAATGATGACTGGGATATTGATAAGTTTATGCAGTATTGCCAAGTGAGTAAGTCGCAACTTTTTCGATTATTTCAG
GAGACATTTAATCAAAGCCCTTTGAGATGGCTTAAAAATTATCGCCTTTCCCAAGCGCGTCGTTTATTAGTGGAAACCGA
GGAGACCATTAGCCGTATTGCTGGGCTGGTGGGGTATAACGACCCGCTGCATTTTTCCCGTGATTTTCATCGGTCAGTCG
GTTTATCCCCAAGTGATTTTCGCCGCCAGGAGCGGCAATTGGATAATGACCGTCACGACTGA

Upstream 100 bases:

>100_bases
CAGAACTCCCCGCGGTATGGACACAATTCTCATGTCAATGGATTTGTGAGCCGCTTCAAAAATTCATCAGTATGATGAGG
GGGAACCTGTTTTTATCTTC

Downstream 100 bases:

>100_bases
GCAATTTCCTGGCTGTCGCCACGCACGATAGGATTATGAGAGATGAGCAGCATACGGCCTCCCGTTGTAGGAGCCGTATG
TGTGTTATCAACAGAATATT

Product: putative araC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRILRAGHIRAADNFHVRRQSVAGHELIFCLNG
SGFIRLENNLHEVKKGNLAWLPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLF
DLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQ
ETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDFRRQERQLDNDRHD

Sequences:

>Translated_313_residues
MACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRILRAGHIRAADNFHVRRQSVAGHELIFCLNG
SGFIRLENNLHEVKKGNLAWLPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLF
DLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQ
ETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDFRRQERQLDNDRHD
>Mature_312_residues
ACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRILRAGHIRAADNFHVRRQSVAGHELIFCLNGS
GFIRLENNLHEVKKGNLAWLPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLFD
LMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQE
TFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDFRRQERQLDNDRHD

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786251, Length=265, Percent_Identity=24.9056603773585, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082197, Length=226, Percent_Identity=24.7787610619469, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37060; Mature: 36929

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRILRAGHIRAAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
NFHVRRQSVAGHELIFCLNGSGFIRLENNLHEVKKGNLAWLPVRWPHEHFPNKQEPWEIL
CHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHCCCEEEEEECCCHHHCCCCCCCCEEE
WLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADAHCDVLCSQ
EEEECCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHH
LIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQ
HHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHH
RRQERQLDNDRHD
HHHHHHCCCCCCC
>Mature Secondary Structure 
ACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRILRAGHIRAAD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
NFHVRRQSVAGHELIFCLNGSGFIRLENNLHEVKKGNLAWLPVRWPHEHFPNKQEPWEIL
CHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHCCCEEEEEECCCHHHCCCCCCCCEEE
WLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADAHCDVLCSQ
EEEECCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHH
LIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQ
HHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHH
RRQERQLDNDRHD
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]