| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930003
Identifier: 218930003
GI number: 218930003
Start: 3299200
End: 3299883
Strand: Direct
Name: 218930003
Synonym: YPO2952
Alternate gene names: NA
Gene position: 3299200-3299883 (Clockwise)
Preceding gene: 218930002
Following gene: 218930004
Centisome position: 70.89
GC content: 46.05
Gene sequence:
>684_bases GTGAGCAGCGCAGATATTTTTAAAAAGATTTTAAGTATTGACACCTTATTATCATTCGATGGTGTCATCCCTTCTTTATC CGAGTTTCAGCTAAAGCTGGTCACCCTGATTGAACAGTTTGGCCACGCGCTGCAATCCGAGGGACATAACGAAACTGAAG TTGATCGTTTATGTCATCAGATTTGTCACTCGCTTGATAAACGTGCGGGAAGTGCAATTAAAGAGAACGGGTTGAGTTGG GAAGGCTATTCATTAGTGCATTACTTCTACGGCTACATCGCGCCGGTCCCTAGCGAAAGCGAAAATTTAGAAGCGCTATT AAACAGTGACGATGCCACAGTCAGTCAATTCGCACTCAAGATACTTGCCCTCTCGCAGAATTTACCGATCCACGATGAAA AATCATTGCAGCTACTGGCGCGCTATAGCCATAGATCCTTGCGCCAAAATATAATCGCCACTGACGATGATATCGACCCA GAGGAGTGGCTGGGTTCAGCGCTAAAGAGGGAAGAAACCATTGAGGCAGAACAAGTGCCTGAGGCCAATATAGTACTTGA GGCCAATATAGTATCTGAGCAACGCCGCTCTTCGCGCCCTTTTTATCTGCAACTTGTCGCGCTGACGCTATTGCTCTCTA CGCTCTGGTTTTGGTGCTCTCGCTATTTAGGTGATCTGTCTTAA
Upstream 100 bases:
>100_bases AGTTGGCCTTTAATACTCAAACCCATCCGAATGCACAAACAATTAGAATATGTCCTTACATGCGAACGCAGGGGTGGGGA GATGTCGTGGAGAAACCCTG
Downstream 100 bases:
>100_bases ATGTTTAAGGTTAAATTGAATAAAACGCTCTCTCTATTATGGCTGGCTGCGGTCGGCGCCCTATTGGTGAGTGTGAATTT TAAGGGAAATGCGTTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSW EGYSLVHYFYGYIAPVPSESENLEALLNSDDATVSQFALKILALSQNLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDP EEWLGSALKREETIEAEQVPEANIVLEANIVSEQRRSSRPFYLQLVALTLLLSTLWFWCSRYLGDLS
Sequences:
>Translated_227_residues MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSW EGYSLVHYFYGYIAPVPSESENLEALLNSDDATVSQFALKILALSQNLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDP EEWLGSALKREETIEAEQVPEANIVLEANIVSEQRRSSRPFYLQLVALTLLLSTLWFWCSRYLGDLS >Mature_226_residues SSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSWE GYSLVHYFYGYIAPVPSESENLEALLNSDDATVSQFALKILALSQNLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPE EWLGSALKREETIEAEQVPEANIVLEANIVSEQRRSSRPFYLQLVALTLLLSTLWFWCSRYLGDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25637; Mature: 25506
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQ CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ICHSLDKRAGSAIKENGLSWEGYSLVHYFYGYIAPVPSESENLEALLNSDDATVSQFALK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH ILALSQNLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPEEWLGSALKREETIEAEQVP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC EANIVLEANIVSEQRRSSRPFYLQLVALTLLLSTLWFWCSRYLGDLS CCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ICHSLDKRAGSAIKENGLSWEGYSLVHYFYGYIAPVPSESENLEALLNSDDATVSQFALK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH ILALSQNLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPEEWLGSALKREETIEAEQVP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC EANIVLEANIVSEQRRSSRPFYLQLVALTLLLSTLWFWCSRYLGDLS CCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA