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The map label for this gene is yiaD [C]

Identifier: 218930004

GI number: 218930004

Start: 3299884

End: 3301566

Strand: Direct

Name: yiaD [C]

Synonym: YPO2953

Alternate gene names: 218930004

Gene position: 3299884-3301566 (Clockwise)

Preceding gene: 218930003

Following gene: 218930005

Centisome position: 70.91

GC content: 45.45

Gene sequence:

>1683_bases
ATGTTTAAGGTTAAATTGAATAAAACGCTCTCTCTATTATGGCTGGCTGCGGTCGGCGCCCTATTGGTGAGTGTGAATTT
TAAGGGAAATGCGTTATGGAATAACGTTATTTTCATTACTTTCCTGGCGCTGATGGTTCTTGCCATCTGGAAACATTACG
CCCTCAAACCCAAACACCCCCAAGTGTCGACTCCCATTCCGCAGGAGACAGCGGAACCTGTAGAACAGGAGAGTACGGTT
ATTTTAATTCTCGGTCCCTATGCTGAGAAATGGTTTAGTAACCCAGAATCGCCAGACAGTACACGTTTTTCCAGCCATGC
GGTTTGGATATTAATCACGAATCCCGCCGCGCTGCAAAAACGCCTCACATATATTGCTGAACATCATCCATCCGCTCGGG
TATTGACCTTTTTCCCTTTCTTGCCGGATGTCTATGAGAATGCAGCAGTGATGATGTCAAAACTCACTGTGTGGCAGAAC
ACTTTTTCAACGTTATCACTGCGATCCCCCCTCCCCTGCGTATTTGCTATTTACGCGCAGTTGAGTAATGAACGCCTTAG
CCATAATTCTGATAACGCATATTGGACTGGAAATATTAATCTTGCGAACCAGCAGCCTATCGAGATTACGCAAGCCCTAC
AGTCACTGAGCCAACGACTTGAGTTACAAGACATCAATCACTCAAGATTTGCAACTCAGCGTAATGTTATGGCGCATAAT
TTATTTACTTGGTTGAATGAATCGGGGGTGACAAACCTTCTGCAATCTATTTTCTCTCGCACCCCCTTACGGCTAACAGA
TGTCATTTTGTCGGATAATGGCAAAGGGTTCATCAGGCATGGTGCCTGGTCAGCCTGGCTGGAAAAAAAGTTTGGCATCA
TACCAAGCTTAGCCTCAACCTTGTCACTGCCACCTTTCCCAGCGGTGATCAATGACCAGAAGCCCGCAATGAAACCACGG
GTGAAAACACCGGTGATAAAACCTACCCCCGCATCCCGCGGGTGGTTATGGAGTGTATGCTTCGCCGCGGTGCTATTAGC
CTCACATATGCTAAACACCCTGTGGCAAGAAAAAAACCGGCATGAGCAATTTAACCAACAGATGGTGCCGTTGGACAATA
TCAGCGATTTTTCTGCTCAGTACCTGGCACGCAGCATCACCCAGTTAACTGATGAAGGTAAAATATTAACCACATGCGTT
AATACATTTGATGTCACACGTTGGGGGCTGTCTCAATGCAAGACGTTATTAAGCCAAATCAACCGCCGGATTGAATCCTA
TGAAAATATTCCTGTTTTCAGTTTTGCCCAAAAGCTCCCTCTGTTTGACTCAAACAGTACCAAGCTGAAACTGAACTCAC
AAACTAATGAAATGATGATGGAGTTGTTATCACTGGTCGAACGGAATAAAGAGAAAAAAATCTTAATTGTTGGCCATTCT
GATAACACAGGCAGTTCCTCCATGAACATGGCACTTTCCGAACAGCGTGCGCTGGCCCTTCGCGATTGGTTAATTAAACG
CAGTGATATCACTGTCGATAATTTTATTACCAAGGGAATGGGGGCTTCAGAACCGGTTGCGACCAATCACACGGAAGCGG
GTCGAGAACAAAACAGACGCGTCGAAGTACTGATATTACCCACACAAGATAGAACAAGAATGACGGAGCCTAAACCTTTA
TGA

Upstream 100 bases:

>100_bases
CCGCTCTTCGCGCCCTTTTTATCTGCAACTTGTCGCGCTGACGCTATTGCTCTCTACGCTCTGGTTTTGGTGCTCTCGCT
ATTTAGGTGATCTGTCTTAA

Downstream 100 bases:

>100_bases
ATGCTATACCTTCAACCTACTCAATTTTTGAGGGCACATTTCTAACACCCGCCCCAGTGTTGGATCGATCGGTGAATATT
TTAATGTTCAGAGATCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; Outer Membrane Protein; OmpA Family Protein; OmpA/MotB; Outer Membrane Lipoprotein; OmpA Family Outer Membrane Protein; OmpA Domain-Containing Protein; Thrombospondin Type 3 RepeatOmpA/MotB; Outer Membrane Protein OmpA; Outer Membrane Protein A; Outer Membrane Porin F; Ompa Domain Protein; Inner Membrane Lipoprotein YiaD; Lipoprotein; OmpA Domain Protein; Type VI Secretion System OmpA/MotB; OmpA Family Domain-Containing Protein; OmpA Family Outer Membrane Lipoprotein; OmpA Family Outer Membrane Protein P; Ompa/Motb Domain Protein; OmpA/MotB Family Protein; Surface Antigen Protein; OmpA Family Membrane Protein; T6ss O; OmpA/MotB Family Outer Membrane Protein; Outer Membrane Protein A OmpA; OmpA Family Peptidoglycan-Associated Lipoprotein

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MFKVKLNKTLSLLWLAAVGALLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVSTPIPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSARVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSRFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAMKPR
VKTPVIKPTPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHEQFNQQMVPLDNISDFSAQYLARSITQLTDEGKILTTCV
NTFDVTRWGLSQCKTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHS
DNTGSSSMNMALSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL

Sequences:

>Translated_560_residues
MFKVKLNKTLSLLWLAAVGALLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVSTPIPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSARVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSRFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAMKPR
VKTPVIKPTPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHEQFNQQMVPLDNISDFSAQYLARSITQLTDEGKILTTCV
NTFDVTRWGLSQCKTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHS
DNTGSSSMNMALSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL
>Mature_560_residues
MFKVKLNKTLSLLWLAAVGALLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVSTPIPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSARVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSRFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAMKPR
VKTPVIKPTPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHEQFNQQMVPLDNISDFSAQYLARSITQLTDEGKILTTCV
NTFDVTRWGLSQCKTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHS
DNTGSSSMNMALSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994946, Length=106, Percent_Identity=35.8490566037736, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63393; Mature: 63393

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVKLNKTLSLLWLAAVGALLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHP
CEEEEECHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVSTPIPQETAEPVEQESTVILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQK
CCCCCCCCHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHH
RLTYIAEHHPSARVLTFFPFLPDVYENAAVMMSKLTVWQNTFSTLSLRSPLPCVFAIYAQ
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
LSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSRFATQRNVMAHN
HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLAST
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCCHHHHHH
LSLPPFPAVINDQKPAMKPRVKTPVIKPTPASRGWLWSVCFAAVLLASHMLNTLWQEKNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HEQFNQQMVPLDNISDFSAQYLARSITQLTDEGKILTTCVNTFDVTRWGLSQCKTLLSQI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
NRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHS
HHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECC
DNTGSSSMNMALSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHCHHHCCE
VEVLILPTQDRTRMTEPKPL
EEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFKVKLNKTLSLLWLAAVGALLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHP
CEEEEECHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVSTPIPQETAEPVEQESTVILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQK
CCCCCCCCHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHH
RLTYIAEHHPSARVLTFFPFLPDVYENAAVMMSKLTVWQNTFSTLSLRSPLPCVFAIYAQ
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
LSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSRFATQRNVMAHN
HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLAST
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCCHHHHHH
LSLPPFPAVINDQKPAMKPRVKTPVIKPTPASRGWLWSVCFAAVLLASHMLNTLWQEKNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HEQFNQQMVPLDNISDFSAQYLARSITQLTDEGKILTTCVNTFDVTRWGLSQCKTLLSQI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
NRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHS
HHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECC
DNTGSSSMNMALSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHCHHHCCE
VEVLILPTQDRTRMTEPKPL
EEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA