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The map label for this gene is hcp1 [H]

Identifier: 218929990

GI number: 218929990

Start: 3279799

End: 3280284

Strand: Reverse

Name: hcp1 [H]

Synonym: YPO2937

Alternate gene names: 218929990

Gene position: 3280284-3279799 (Counterclockwise)

Preceding gene: 218929991

Following gene: 218929989

Centisome position: 70.49

GC content: 41.56

Gene sequence:

>486_bases
ATGGCGCAAGATATGTTTATCAAAATTGATGGTATTGAAGGTGAGTCTTTGGATGCCAATCACAAAAACGAAATCCAGGT
ATTAGCTTGGAACTGGGATGTTGCTCAACACTCGAATATGCACAGCGGTTCAGGTGGCGGTTCAGGTAAAGCCTCTGTTT
CAGATTTTTGCTTCGCACATTATATCGATAAAGCTAGCCCGAACTTATTGAGCTATTGCTTGTTGGGTAAGCACATTAAA
AATGTTCAGTTCGTACTGCGTAAAGCTGGTGGCGATCCGCTGGAATATCTGACAATTAAATTTACCGATGTCATCATTAC
TCGTGTTGATATGGCGGGTTCTTTGGAAGATGAAACGCGTCCACGTGAAGAAATTCGTTTCTCATTCACTAAGATGACTC
AGGACTATGTTATGCAGAATGCTGAAGGCCATAAGTCTGGCGTTATTTCTGCTAACTACGATGTTAAAGCTAACATGCAC
AGCTAA

Upstream 100 bases:

>100_bases
ATATCAAAGGAAAGGGATGTGCCTCCGTATTCATATGGGGTCTTCCTACACTCGATGTTTTGCATTGAGTGACATTTATA
AAAGTGCTAGAGAGGATATT

Downstream 100 bases:

>100_bases
TTAAGTTGAGCATGTCGCTATCAAACTTGCCACCTTTGGGGTGGCAGGTTTTCTTAATAAGTGGTTTGAGTGACATATAC
GACAGGTACATCGTCCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAHYIDKASPNLLSYCLLGKHIK
NVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETRPREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMH
S

Sequences:

>Translated_161_residues
MAQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAHYIDKASPNLLSYCLLGKHIK
NVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETRPREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMH
S
>Mature_160_residues
AQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAHYIDKASPNLLSYCLLGKHIKN
VQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETRPREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMHS

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17930; Mature: 17799

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAH
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHH
YIDKASPNLLSYCLLGKHIKNVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCC
PREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMHS
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCC
>Mature Secondary Structure 
AQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAH
CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHH
YIDKASPNLLSYCLLGKHIKNVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCC
PREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMHS
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]