| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is guaB [H]
Identifier: 218929931
GI number: 218929931
Start: 3205218
End: 3206681
Strand: Reverse
Name: guaB [H]
Synonym: YPO2871
Alternate gene names: 218929931
Gene position: 3206681-3205218 (Counterclockwise)
Preceding gene: 218929933
Following gene: 218929930
Centisome position: 68.91
GC content: 51.64
Gene sequence:
>1464_bases ATGCTACGTATCGCGAAAGAAGCACTAACATTTGATGACGTTCTCCTGGTTCCAGCCCACTCCACAGTCTTGCCTAACAC GGCAGAACTTGGCACTCAACTGACCGCAACTATCCGCCTGAATATTCCTATGCTGTCCGCAGCCATGGATACCGTAACCG AATCTCGTCTGGCCATTGCGCTGGCACAAGAAGGCGGTTTGGGTTTCATTCACAAAAATATGTCCATTGAGCGCCAGGCT GAAGAAGTCAGCCGCGTGAAAAAACATGAAAGTGGCGTTGTTACTGAGCCACAGACTGTTACCCCAACAACGACCCTCCG TCAGGTTAAAGAATTGACTGCCCGTAACGGTTTTGCCGGGTATCCGGTGGTGACCGAAGATTACGAATTGGTTGGGATCA TCACTGGCCGTGATGTTCGCTTTGTGACTGATTTGGATCAACCGGTGACCGCGGTGATGACACCGAAAGAACGCTTGGTG ACGGTCAAGGAAGGCGAAACCCGCGAAGTTGTGCTGCAAAAAATGCACGAAAAACGTGTAGAGAAAGTGTTGGTCGTTGA TGACAGCTTTCATTTGCGCGGCATGATAACCGTAAAAGATTTCCAAAAAGCAGAACGTAAGCCAAATGCCTGTAAAGACG AGCATGGCCGTTTGCGTGTTGGTGCCGCTGTTGGTGCCGGTGCTGGCAATGAAGAGCGTATCGACGCGCTGGTCGCCGCT GGTGTTGATGTATTACTGATAGACTCCTCTCATGGTCATTCTGAAGGTGTTCTGCAACGTATCCGTGAAACTCGCGCTAA ATATCCTAACTTGCAAATTGTGGGCGGTAACGTCGCAACCGGTGCTGGGGCGAAAGCGTTGGCAGATGCCGGTGTGAGTG CGGTTAAGGTGGGTATCGGCCCAGGTTCAATCTGTACGACGCGCATTGTTACCGGTGTTGGTGTTCCACAGATTACCGCG ATTGCCGATGCTGTTGAAGCACTGGAAGGTACCGGTATTCCGGTTATCGCTGATGGTGGTATCCGTTTCTCCGGCGATAT TGCCAAAGCGATTGCTGCAGGGGCGTCTTGCGTCATGGTCGGTTCTATGTTGGCTGGTACTGAAGAGTCTCCGGGCGAAA TCGAACTGTATCAAGGTCGCTCCTTCAAATCTTACCGTGGCATGGGGTCGCTGGGCGCGATGTCCAAAGGCTCTTCCGAC CGTTACTTCCAAACCGATAATGCGGCCGATAAATTGGTTCCAGAAGGTATCGAAGGGCGCGTAGCCTACAAAGGCCTGCT GAAAGAGATCGTGCACCAACAAATGGGCGGCCTGCGTTCTTGCATGGGGCTGACCGGTTGCGGCACTATCAATGAATTGC GCACTAAAGCGGAGTTCGTCCGCATCAGTGGTGCCGGCATTCAAGAAAGCCATGTGCATGATGTGACGATTACTAAAGAG TCACCTAATTATCGTATGATGTAA
Upstream 100 bases:
>100_bases GAAATATTATGAGAAAGTGCTGGAGGCAATCGATTACGCTCTGTATAATGCCACGGCAATATTTTATCTTTTTCACATTC ACCTTGGTGAGATATTGCCC
Downstream 100 bases:
>100_bases CAATTAGTTAAATAATCATCTGGTGCTGGCCATCAGATGGTTATTTTTTATTTTAAAATCAATACCCAAAGTCATTGGCG TTGCAGTAAGGCAGCAAATA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDTVTESRLAIALAQEGGLGFIHKNMSIERQA EEVSRVKKHESGVVTEPQTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVRFVTDLDQPVTAVMTPKERLV TVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPNLQIVGGNVATGAGAKALADAGVSAVKVGIGPGSICTTRIVTGVGVPQITA IADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQTDNAADKLVPEGIEGRVAYKGLLKEIVHQQMGGLRSCMGLTGCGTINELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRMM
Sequences:
>Translated_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDTVTESRLAIALAQEGGLGFIHKNMSIERQA EEVSRVKKHESGVVTEPQTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVRFVTDLDQPVTAVMTPKERLV TVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPNLQIVGGNVATGAGAKALADAGVSAVKVGIGPGSICTTRIVTGVGVPQITA IADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQTDNAADKLVPEGIEGRVAYKGLLKEIVHQQMGGLRSCMGLTGCGTINELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRMM >Mature_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDTVTESRLAIALAQEGGLGFIHKNMSIERQA EEVSRVKKHESGVVTEPQTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVRFVTDLDQPVTAVMTPKERLV TVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPNLQIVGGNVATGAGAKALADAGVSAVKVGIGPGSICTTRIVTGVGVPQITA IADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQTDNAADKLVPEGIEGRVAYKGLLKEIVHQQMGGLRSCMGLTGCGTINELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRMM
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=456, Percent_Identity=41.4473684210526, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI217035146, Length=462, Percent_Identity=40.2597402597403, Blast_Score=322, Evalue=4e-88, Organism=Homo sapiens, GI156616279, Length=462, Percent_Identity=40.2597402597403, Blast_Score=322, Evalue=7e-88, Organism=Homo sapiens, GI34328930, Length=462, Percent_Identity=40.2597402597403, Blast_Score=321, Evalue=8e-88, Organism=Homo sapiens, GI34328928, Length=462, Percent_Identity=40.2597402597403, Blast_Score=321, Evalue=1e-87, Organism=Homo sapiens, GI217035152, Length=451, Percent_Identity=40.5764966740577, Blast_Score=315, Evalue=9e-86, Organism=Homo sapiens, GI217035148, Length=462, Percent_Identity=39.6103896103896, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI217035150, Length=462, Percent_Identity=37.2294372294372, Blast_Score=282, Evalue=6e-76, Organism=Homo sapiens, GI156104880, Length=247, Percent_Identity=35.6275303643725, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=35.2226720647773, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=35.2226720647773, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=35.2226720647773, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=35.2226720647773, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=92.1810699588477, Blast_Score=851, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=37.10407239819, Blast_Score=145, Evalue=5e-36, Organism=Caenorhabditis elegans, GI71994385, Length=478, Percent_Identity=35.5648535564854, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71994389, Length=423, Percent_Identity=38.0614657210402, Blast_Score=261, Evalue=8e-70, Organism=Caenorhabditis elegans, GI17560440, Length=219, Percent_Identity=37.8995433789954, Blast_Score=151, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6322012, Length=487, Percent_Identity=38.6036960985626, Blast_Score=313, Evalue=5e-86, Organism=Saccharomyces cerevisiae, GI6323585, Length=466, Percent_Identity=38.8412017167382, Blast_Score=308, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6323464, Length=445, Percent_Identity=41.3483146067416, Blast_Score=302, Evalue=9e-83, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=38.3040935672515, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6319353, Length=118, Percent_Identity=39.8305084745763, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=40.1656314699793, Blast_Score=322, Evalue=4e-88, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=40.1656314699793, Blast_Score=322, Evalue=4e-88, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=41.2698412698413, Blast_Score=294, Evalue=7e-80,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51825; Mature: 51825
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDTVTESRLAIA CCEEHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHCCEEEE LAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVVTEPQTVTPTTTLRQVKELTARNGFAG EECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC YPVVTEDYELVGIITGRDVRFVTDLDQPVTAVMTPKERLVTVKEGETREVVLQKMHEKRV CCEEECCCEEEEEEECCCEEEEECCCCCEEEEECCHHHEEEECCCCHHHHHHHHHHHHHH EKVLVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIDALVAA CEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKYPNLQIVGGNVATGAGAKALADAGVSAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCHHHHHHCCCEEEEEECC PGSICTTRIVTGVGVPQITAIADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMV CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHCCCHHHHH GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCH VAYKGLLKEIVHQQMGGLRSCMGLTGCGTINELRTKAEFVRISGAGIQESHVHDVTITKE HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEEEEEEC SPNYRMM CCCCCCC >Mature Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDTVTESRLAIA CCEEHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHCCEEEE LAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVVTEPQTVTPTTTLRQVKELTARNGFAG EECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC YPVVTEDYELVGIITGRDVRFVTDLDQPVTAVMTPKERLVTVKEGETREVVLQKMHEKRV CCEEECCCEEEEEEECCCEEEEECCCCCEEEEECCHHHEEEECCCCHHHHHHHHHHHHHH EKVLVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIDALVAA CEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKYPNLQIVGGNVATGAGAKALADAGVSAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCHHHHHHCCCEEEEEECC PGSICTTRIVTGVGVPQITAIADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASCVMV CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHCCCHHHHH GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCH VAYKGLLKEIVHQQMGGLRSCMGLTGCGTINELRTKAEFVRISGAGIQESHVHDVTITKE HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEEEEEEC SPNYRMM CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]