Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is folD [H]
Identifier: 218929889
GI number: 218929889
Start: 3151967
End: 3152833
Strand: Direct
Name: folD [H]
Synonym: YPO2824
Alternate gene names: 218929889
Gene position: 3151967-3152833 (Clockwise)
Preceding gene: 218929888
Following gene: 218929890
Centisome position: 67.73
GC content: 51.44
Gene sequence:
>867_bases ATGTCAGCAAAAATTATTGATGGTAAAACGATTGCGCAGCAGGTAAGAAACGAAGTTGCTGCGGTGGTTCAACAACGTCT GGCAGCAGGTAAGCGTGCCCCCGGTCTGGCGGTTGTCTTGGTCGGTGAAAACCCGGCGTCACAGATCTATGTGGCAAGTA AGCGTAAGGCTTGTGAAGAGGTGGGCTTTGTCTCACGCTCTTATGATCTGCCAATGGCGACCAGTGAAGCAGAGCTACTG GCCCTGATTGATTCATTGAATGAAGATACCGAAATCGACGGCATTCTAATACAACTGCCACTGCCTAACGGGATTGATAA CGTTAAAGTTCTGGAGCGTATTCACCCTGATAAGGATGTGGATGGTTTCCACCCATATAACGTGGGCCGCCTGTGCCAGC GTGCGCCAAAACTGCGCGCTTGTACCCCCCGTGGCATCATGACGCTGTTAGAACGTTATGACATCCCAACTTACGGCCTG AACGCGGTGGTCGTCGGCGCATCCAATATTGTTGGTCGCCCGATGAGTCTTGAATTGCTGCTGGCCGGTTGCACCACCAC GGTTACCCATCGCTTTACTAAGAATCTGCGTCACCATATTGAGAATGCCGACCTGCTGGTGGTCGCTGTCGGTAAACCGG GCTTTATTCCCGGAGAATGGATTAAACCGGGCGCTATCGTGATTGATGTGGGTATTAACCGTCTGGAAAGTGGTAAAGTA GTCGGCGATGTAGCATTTGATGTCGCTGCTGAACGTGCGGGTTGGATTACACCGGTTCCAGGTGGCGTCGGGCCAATGAC CGTTGCAACACTGATACAAAATACCTTGCAAGCCTGCGAGGAATATCACGACATCAGCCAAAATTGA
Upstream 100 bases:
>100_bases TTAATCGTTAATTAATCGTCATTATGCGCCTGACAGCGCGGCCCGCTTCTGACAAAATAGGCCGATTCCCGTTTTTTTCA ATTGATGGACCCCTCCACTG
Downstream 100 bases:
>100_bases GTTAAAGGACAGTAATGGACATTTTTCATTTGGAAAAACACCCCCATGTCGAGCTATGTGACCTACTAAAGTTACAAGGT TGGAATGACAGCGGTGCATC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENPASQIYVASKRKACEEVGFVSRSYDLPMATSEAELL ALIDSLNEDTEIDGILIQLPLPNGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGL NAVVVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLESGKV VGDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEEYHDISQN
Sequences:
>Translated_288_residues MSAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENPASQIYVASKRKACEEVGFVSRSYDLPMATSEAELL ALIDSLNEDTEIDGILIQLPLPNGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGL NAVVVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLESGKV VGDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEEYHDISQN >Mature_287_residues SAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENPASQIYVASKRKACEEVGFVSRSYDLPMATSEAELLA LIDSLNEDTEIDGILIQLPLPNGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGLN AVVVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLESGKVV GDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEEYHDISQN
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=45.2380952380952, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI222136639, Length=291, Percent_Identity=43.9862542955326, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=42.1768707482993, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI36796743, Length=229, Percent_Identity=31.0043668122271, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=86.6197183098592, Blast_Score=508, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17568735, Length=290, Percent_Identity=40.6896551724138, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=42.9530201342282, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=42.4561403508772, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6322933, Length=319, Percent_Identity=25.3918495297806, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=48.1481481481481, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=48.1481481481481, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI24645718, Length=293, Percent_Identity=41.9795221843003, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI17137370, Length=293, Percent_Identity=41.9795221843003, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI62472483, Length=293, Percent_Identity=41.9795221843003, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI45551871, Length=293, Percent_Identity=41.9795221843003, Blast_Score=206, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30983; Mature: 30852
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENPASQIYVASKRKACEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHH VGFVSRSYDLPMATSEAELLALIDSLNEDTEIDGILIQLPLPNGIDNVKVLERIHPDKDV HCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGLNAVVVGASNIVGRPMSLELL CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCCEEEEE LAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLESGKV EECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCE VGDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEEYHDISQN EEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENPASQIYVASKRKACEE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHH VGFVSRSYDLPMATSEAELLALIDSLNEDTEIDGILIQLPLPNGIDNVKVLERIHPDKDV HCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGLNAVVVGASNIVGRPMSLELL CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCCEEEEE LAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLESGKV EECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCE VGDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEEYHDISQN EEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA