Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218929888
Identifier: 218929888
GI number: 218929888
Start: 3151430
End: 3151612
Strand: Direct
Name: 218929888
Synonym: YPO2823
Alternate gene names: NA
Gene position: 3151430-3151612 (Clockwise)
Preceding gene: 218929887
Following gene: 218929889
Centisome position: 67.72
GC content: 44.26
Gene sequence:
>183_bases ATGGCTACAAGATATATTAAATGGCCCGAGATGTTGCTGCTAGTTGGAAAGAGTAGGCCAACAATCTGGCGCATGTATTC CAAGCGTAATGAATTCCCGAAACCAGAGCGCACAAAAAGCGGGATGTTTTTAGGTTGGCCTGAAGCTTCTTATGAGGAAT GGGTTCAAAGCAAGAAGTGCTAA
Upstream 100 bases:
>100_bases GGTCGGCTTTATTTGCGTTTTTCAAGTTGATTTTTAAAAATCAAAACCAATCCAGCCAAGAGCGTTTTGGTCGGTTGCGT GGCAAGCAAGACGGCTAATT
Downstream 100 bases:
>100_bases ATCACTACCTGACCCGTCTAAATGGCGGGTTTTGTATTTTAAGCGGTAACTTATTGATTTTATTGGTACGCCCTACAGGG CTCGAACCTGTGACCTACGG
Product: putative regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEASYEEWVQSKKC
Sequences:
>Translated_60_residues MATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEASYEEWVQSKKC >Mature_59_residues ATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEASYEEWVQSKKC
Specific function: Unknown
COG id: COG3311
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7285; Mature: 7153
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEASYEEWVQSKKC CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCC >Mature Secondary Structure ATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEASYEEWVQSKKC CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA