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The map label for this gene is recO [H]

Identifier: 218929792

GI number: 218929792

Start: 3048169

End: 3048894

Strand: Direct

Name: recO [H]

Synonym: YPO2720

Alternate gene names: 218929792

Gene position: 3048169-3048894 (Clockwise)

Preceding gene: 218929791

Following gene: 218929793

Centisome position: 65.5

GC content: 51.24

Gene sequence:

>726_bases
ATGGACGGTTGGCAACGCGCATTTGTTCTGCATGGGCGGCCTTACAGTGAAACCAGCTTAATGCTGGATTTATTTACTGA
AGGGGAAGGGCGCATGCGGGTTCTGGCAAAAGGTGCGCGTGGGCGTCGTTCCAATTTAAAAGGCTGCTTGCAGCCTTTTA
CGCCGTTATTGGTTCGCTGGTCAGGGCGTGGTGAAGTTAAAACATTACGCAGTGCGGAGCCAGTATCGCTGGCTCTTCCC
CTGAGCGGTTCTATGTTATACAGCGGCTTATATGTTAATGAGCTGCTTTCCCGCGTGTTAGAGCACCAAACCAGCTACTC
AGCCCTATTCTTCGATTATCTGCACTGCTTACAAGCGTTGGCGGGGAGCGATGGTTCACCTGAACATGCTTTACGTCAGT
TTGAATTGGCGATGCTGGCGAATCTGGGATATGGCGTCGATTTTCTGCATTGTGCCGGTAGCGGGCAGCCGGTATCCGAT
ACCATGACCTATCGTTATCGGGAAGAGAAAGGCTTTATTGCCAGTCTGGTGGTCGATCACTACAGCTTTACCGGCCGTCA
ATTGTTAGCTTTAGCCAATCGAGAGTTTCCTGACGCCGATACTTTGCGCGCGGCTAAACGTTTCACCCGTATCGCCCTCA
AACCTTATCTGGGCGGTAAACCTTTAAAGAGTCGCGAGCTATTTCGTCAGTTTGTGATTAAGCCTCCAGCCGATCCTTCA
CCCTAG

Upstream 100 bases:

>100_bases
GCATCTTGAACTGTGGGTGAAAGTGAAATCAGGCTGGGCAGATGACGAACGTGCATTGCGCAGCTTAGGCTATACCGACG
ATTTGAAATAAGGCTTGCCG

Downstream 100 bases:

>100_bases
CGCTGCTTTAAACTGCCTATTATTAACTTTCCCGTAGTGTTGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTG
AAATCAGATCCAGGGGGTAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSGRGEVKTLRSAEPVSLALP
LSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQALAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSD
TMTYRYREEKGFIASLVVDHYSFTGRQLLALANREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPS
P

Sequences:

>Translated_241_residues
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSGRGEVKTLRSAEPVSLALP
LSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQALAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSD
TMTYRYREEKGFIASLVVDHYSFTGRQLLALANREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPS
P
>Mature_241_residues
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSGRGEVKTLRSAEPVSLALP
LSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQALAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSD
TMTYRYREEKGFIASLVVDHYSFTGRQLLALANREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPS
P

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=234, Percent_Identity=78.6324786324786, Blast_Score=382, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26934; Mature: 26934

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRW
CCCCCEEEEECCCCCCCHHEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEE
SGRGEVKTLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQAL
CCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASLVVDH
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHEEEECCCCHHHHHHHHH
YSFTGRQLLALANREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPS
HCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC
P
C
>Mature Secondary Structure
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRW
CCCCCEEEEECCCCCCCHHEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEE
SGRGEVKTLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQAL
CCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASLVVDH
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHEEEECCCCHHHHHHHHH
YSFTGRQLLALANREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPS
HCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA