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The map label for this gene is rseA [H]

Identifier: 218929784

GI number: 218929784

Start: 3039973

End: 3040629

Strand: Direct

Name: rseA [H]

Synonym: YPO2712

Alternate gene names: 218929784

Gene position: 3039973-3040629 (Clockwise)

Preceding gene: 218929783

Following gene: 218929785

Centisome position: 65.32

GC content: 46.27

Gene sequence:

>657_bases
ATGCAGAAAGAAAAGCTTTCCGCTTTGATGGATGGAGAAACTCTCGATAGCGAGCTGCTGGGGATTTTATCGAAAGATAA
GGCGTTACAGCAAAGCTGGCAGAGCTACCATTTAATCCGTGACACTCTACGCGGAGACGTTGGCAATGTTTTACATCTGG
ATATTGCTAGTCGTGTAGCAGAAGCGCTCAAGAACGAGCCAGCGCGCTTGATTCCTATTGCTATACCTGAATCTCAGCCA
CAGCCACATCTTTGGCAGAAAATGCCTTTCTGGCAAAAAGTCCGTCCATGGGCCAGTCAGATTACTCAGGTGGGAATGGC
CGCTTGTGTTTCTCTCGCTGTCATTGTTGGTGTTCAACAATATAACCAACCGGCACAAAATTATTTACAACCTGAATCAC
CGGCGTTTAATACCTTGCCAATGATGGGTAAAGCATCACCAGTCAGTTTTGGTGTCCCTGCTGATGGTTCTTTTGGTACT
AATCAACAGAATCAGGTTCAAGAGCAGCGTCGGCGCGTCAACATGATGACTCAATTGCAAGATTTTGAATTGCAACGTCG
TTTGCCACAAACTGATGTATTGCAGCAGCCTTCAGATTCAACGCAAGCCGCAATTCAAGTCCCTGGAACTCAATCCTTAG
GAATGCAGCAGCAGTAA

Upstream 100 bases:

>100_bases
GGTACTGTTCGTTCACGTATCTTCCGTGCCAGAGAAGCTATTGATAACAAAGTTCAGCCGCTAATTCAGCGATAGGCGGA
CACACAAAGGGTATTTAGGC

Downstream 100 bases:

>100_bases
TGAAGCAACTTTGGTTTTCCGTCTGTTTAATGACGGGCAGCCTGTTCATGGCAAACATTGCTTCGGCGGAATCTACGCCG
ATAGCAATGTTGCAGGAAAT

Product: anti-RNA polymerase sigma factor SigE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQKEKLSALMDGETLDSELLGILSKDKALQQSWQSYHLIRDTLRGDVGNVLHLDIASRVAEALKNEPARLIPIAIPESQP
QPHLWQKMPFWQKVRPWASQITQVGMAACVSLAVIVGVQQYNQPAQNYLQPESPAFNTLPMMGKASPVSFGVPADGSFGT
NQQNQVQEQRRRVNMMTQLQDFELQRRLPQTDVLQQPSDSTQAAIQVPGTQSLGMQQQ

Sequences:

>Translated_218_residues
MQKEKLSALMDGETLDSELLGILSKDKALQQSWQSYHLIRDTLRGDVGNVLHLDIASRVAEALKNEPARLIPIAIPESQP
QPHLWQKMPFWQKVRPWASQITQVGMAACVSLAVIVGVQQYNQPAQNYLQPESPAFNTLPMMGKASPVSFGVPADGSFGT
NQQNQVQEQRRRVNMMTQLQDFELQRRLPQTDVLQQPSDSTQAAIQVPGTQSLGMQQQ
>Mature_218_residues
MQKEKLSALMDGETLDSELLGILSKDKALQQSWQSYHLIRDTLRGDVGNVLHLDIASRVAEALKNEPARLIPIAIPESQP
QPHLWQKMPFWQKVRPWASQITQVGMAACVSLAVIVGVQQYNQPAQNYLQPESPAFNTLPMMGKASPVSFGVPADGSFGT
NQQNQVQEQRRRVNMMTQLQDFELQRRLPQTDVLQQPSDSTQAAIQVPGTQSLGMQQQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=218, Percent_Identity=63.302752293578, Blast_Score=249, Evalue=9e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 24342; Mature: 24342

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEKLSALMDGETLDSELLGILSKDKALQQSWQSYHLIRDTLRGDVGNVLHLDIASRVA
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
EALKNEPARLIPIAIPESQPQPHLWQKMPFWQKVRPWASQITQVGMAACVSLAVIVGVQQ
HHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQPAQNYLQPESPAFNTLPMMGKASPVSFGVPADGSFGTNQQNQVQEQRRRVNMMTQLQ
HCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DFELQRRLPQTDVLQQPSDSTQAAIQVPGTQSLGMQQQ
HHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MQKEKLSALMDGETLDSELLGILSKDKALQQSWQSYHLIRDTLRGDVGNVLHLDIASRVA
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
EALKNEPARLIPIAIPESQPQPHLWQKMPFWQKVRPWASQITQVGMAACVSLAVIVGVQQ
HHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQPAQNYLQPESPAFNTLPMMGKASPVSFGVPADGSFGTNQQNQVQEQRRRVNMMTQLQ
HCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DFELQRRLPQTDVLQQPSDSTQAAIQVPGTQSLGMQQQ
HHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]