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The map label for this gene is rseB [H]

Identifier: 218929785

GI number: 218929785

Start: 3040629

End: 3041585

Strand: Direct

Name: rseB [H]

Synonym: YPO2713

Alternate gene names: 218929785

Gene position: 3040629-3041585 (Clockwise)

Preceding gene: 218929784

Following gene: 218929786

Centisome position: 65.34

GC content: 47.75

Gene sequence:

>957_bases
ATGAAGCAACTTTGGTTTTCCGTCTGTTTAATGACGGGCAGCCTGTTCATGGCAAACATTGCTTCGGCGGAATCTACGCC
GATAGCAATGTTGCAGGAAATGGGCAGTGCCAGCAAGTCGCTCAATTATGAGCTATCTTATATTAACGTTAACAAGCAAG
GGATTGATTCCCTTCGTTATCGGCATGCCATTTTAGATAAAAAATCGTTAGCGCAATTGTTGCGTATGGACGGTCCGCGT
ACGGAAATTTTACAGCGTGGCAATGAGATAAGCTATTTCGAGCCCGGTTTTGAATCTTTCACGTTGTCCGGTGAGCACAT
TGTTGATGCTCTGCCGTCTATTGTTTTCTCCAATTTTGAAAAACTATCCAAGACGTATAACTATATTGCGTTAGGCCGGG
CACGTGTGGCTGATAGGCCATGCCAGGTGATTCGAGTGGTCGCTAATGACAGTACTCGGTACAGCTATATTATTTGGCTG
GATGAGGCAACGAAACTGCCAATGCGGATAGATTTGTTGGATCGTGATGGCGAAACACTGGAGCAATTCCGTGTTATCTC
TTTTGTGGTGGGTGAGCCTATTCAGCAAGTCTTACAAGGTATGCTGAAATTAGCCTTGCCACCATTACTGTCGTTGCCAG
CGAAGACTAAAGTTGATTTTACCTGGGCTCCGCGTTGGTTACCGCAGGGGGTCGCAGAGGTTTCACGTAGTCGCCGTACA
CTGCCGAATATGGATGCACCCACAGAGTCTCGCTTGTATACCGATGGTTTGTTTAGTTTTTCAGTCAATGTGAATCCCGC
AGGCAAGGAGGGGACTTCGGAACAATCCCTGCGTCAGGGGCGGCGTACTGTCCAGACTGAAGTCCGTAATAACGTCGAGA
TAACGGTAGTGGGTGAGTTGCCACCTTCAACGGCCAAACGTATTGCCGACAGTGTGGTTCTGGAGTCGACAAAATGA

Upstream 100 bases:

>100_bases
GTCGTTTGCCACAAACTGATGTATTGCAGCAGCCTTCAGATTCAACGCAAGCCGCAATTCAAGTCCCTGGAACTCAATCC
TTAGGAATGCAGCAGCAGTA

Downstream 100 bases:

>100_bases
TGAAGGAATGGGCGACGGTGATATCATGGCAAAATGGTATTGCCCTATTACGTTGTGAACCACACTCTGGTTGTGGGAAT
TGCCATTCTCGCCGAGGATG

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKQLWFSVCLMTGSLFMANIASAESTPIAMLQEMGSASKSLNYELSYINVNKQGIDSLRYRHAILDKKSLAQLLRMDGPR
TEILQRGNEISYFEPGFESFTLSGEHIVDALPSIVFSNFEKLSKTYNYIALGRARVADRPCQVIRVVANDSTRYSYIIWL
DEATKLPMRIDLLDRDGETLEQFRVISFVVGEPIQQVLQGMLKLALPPLLSLPAKTKVDFTWAPRWLPQGVAEVSRSRRT
LPNMDAPTESRLYTDGLFSFSVNVNPAGKEGTSEQSLRQGRRTVQTEVRNNVEITVVGELPPSTAKRIADSVVLESTK

Sequences:

>Translated_318_residues
MKQLWFSVCLMTGSLFMANIASAESTPIAMLQEMGSASKSLNYELSYINVNKQGIDSLRYRHAILDKKSLAQLLRMDGPR
TEILQRGNEISYFEPGFESFTLSGEHIVDALPSIVFSNFEKLSKTYNYIALGRARVADRPCQVIRVVANDSTRYSYIIWL
DEATKLPMRIDLLDRDGETLEQFRVISFVVGEPIQQVLQGMLKLALPPLLSLPAKTKVDFTWAPRWLPQGVAEVSRSRRT
LPNMDAPTESRLYTDGLFSFSVNVNPAGKEGTSEQSLRQGRRTVQTEVRNNVEITVVGELPPSTAKRIADSVVLESTK
>Mature_318_residues
MKQLWFSVCLMTGSLFMANIASAESTPIAMLQEMGSASKSLNYELSYINVNKQGIDSLRYRHAILDKKSLAQLLRMDGPR
TEILQRGNEISYFEPGFESFTLSGEHIVDALPSIVFSNFEKLSKTYNYIALGRARVADRPCQVIRVVANDSTRYSYIIWL
DEATKLPMRIDLLDRDGETLEQFRVISFVVGEPIQQVLQGMLKLALPPLLSLPAKTKVDFTWAPRWLPQGVAEVSRSRRT
LPNMDAPTESRLYTDGLFSFSVNVNPAGKEGTSEQSLRQGRRTVQTEVRNNVEITVVGELPPSTAKRIADSVVLESTK

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=313, Percent_Identity=63.8977635782748, Blast_Score=421, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35669; Mature: 35669

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLWFSVCLMTGSLFMANIASAESTPIAMLQEMGSASKSLNYELSYINVNKQGIDSLRY
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHH
RHAILDKKSLAQLLRMDGPRTEILQRGNEISYFEPGFESFTLSGEHIVDALPSIVFSNFE
HHHHHCHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCEECCCHHHHHHHHHHHHHHHH
KLSKTYNYIALGRARVADRPCQVIRVVANDSTRYSYIIWLDEATKLPMRIDLLDRDGETL
HHHHHHHHHEECCHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCHHH
EQFRVISFVVGEPIQQVLQGMLKLALPPLLSLPAKTKVDFTWAPRWLPQGVAEVSRSRRT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
LPNMDAPTESRLYTDGLFSFSVNVNPAGKEGTSEQSLRQGRRTVQTEVRNNVEITVVGEL
CCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECC
PPSTAKRIADSVVLESTK
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQLWFSVCLMTGSLFMANIASAESTPIAMLQEMGSASKSLNYELSYINVNKQGIDSLRY
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHH
RHAILDKKSLAQLLRMDGPRTEILQRGNEISYFEPGFESFTLSGEHIVDALPSIVFSNFE
HHHHHCHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCEECCCHHHHHHHHHHHHHHHH
KLSKTYNYIALGRARVADRPCQVIRVVANDSTRYSYIIWLDEATKLPMRIDLLDRDGETL
HHHHHHHHHEECCHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCHHH
EQFRVISFVVGEPIQQVLQGMLKLALPPLLSLPAKTKVDFTWAPRWLPQGVAEVSRSRRT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
LPNMDAPTESRLYTDGLFSFSVNVNPAGKEGTSEQSLRQGRRTVQTEVRNNVEITVVGEL
CCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECC
PPSTAKRIADSVVLESTK
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]