| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is chbG
Identifier: 218929755
GI number: 218929755
Start: 3007219
End: 3007980
Strand: Direct
Name: chbG
Synonym: YPO2682
Alternate gene names: 218929755
Gene position: 3007219-3007980 (Clockwise)
Preceding gene: 218929754
Following gene: 218929758
Centisome position: 64.62
GC content: 50.39
Gene sequence:
>762_bases ATGGAAAAATTACTTATTGTTAATGCCGATGATTTTGGTCTGTGTAAAGGGCAAAACTACGGGATCATTGACGCCTTCCG CAACGGCGTAGTCTCCTCGACGACCGCAATGATGAACAGTGTGGATATTAACCATGCGGCGGAACTCAGTGCGCAATATC CGGCACTGCCGGTGGGGATGCATTTTGTATTGACCTTCGGACGTCCATTGACCGCAATGCCTTCTTTAACCGACGCGAAT GGTGAACTGGGTAAATGGCTATGGCAGCGTGCTGGAGCAGGGACATTGGATCTGAATGAGATAGCGCAAGAGCTGGAATG CCAGTTCGAGCGGTTTAGTGCGGTCTTTGGCCGCCCTCCGACCCACATTGACAGCCATCATCACGTGCATATGTTGCCGC AGATTTATCCCTTAGTCGCCGCCTTCGCCCGTGAAAAATCACTCCCGCTGCGTATTGATCGACATGAAGTGCAGCAACAT GGGCTCACTCTCGATAACCCACGTAGTAGCGAGTGGTTTAACGCTGGCTTCTATGGTGAGAACTTATCAGAGCCGTCGTT CTTGCAGCTACTGGAACACGCTGATCAACAAGGCGTTAACTCGCTGGAAATTATGTGTCATCCGGCCTTTATCGATCAGA CGTTGATGACCAGTGGTTATTGTTATCCGCGATTGACCGAGTTGGCGATTTTGACCTCTCCGACATTAAAGCCCGCTATC GCGCAACGTGGTTATCGGCTGGGGTCGTTTTTAGATTGTTAA
Upstream 100 bases:
>100_bases AAACTATCGCAAGAACTTCTACAGCGCCAGAGAGAGTTTATCCCATTAGTTTTCCAACCGGTTATTCCCATAGTGGGAGA GGGTTGGCAAGGAACCTTTA
Downstream 100 bases:
>100_bases TTTTGTTTACTCAGGTGCATGGGTCGTGACTATATAGAAGACGACAAATAGGAAAGATAATAAAATGGCGAGCTTGCCTT TATCTGTTTCGATTTTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MEKLLIVNADDFGLCKGQNYGIIDAFRNGVVSSTTAMMNSVDINHAAELSAQYPALPVGMHFVLTFGRPLTAMPSLTDAN GELGKWLWQRAGAGTLDLNEIAQELECQFERFSAVFGRPPTHIDSHHHVHMLPQIYPLVAAFAREKSLPLRIDRHEVQQH GLTLDNPRSSEWFNAGFYGENLSEPSFLQLLEHADQQGVNSLEIMCHPAFIDQTLMTSGYCYPRLTELAILTSPTLKPAI AQRGYRLGSFLDC
Sequences:
>Translated_253_residues MEKLLIVNADDFGLCKGQNYGIIDAFRNGVVSSTTAMMNSVDINHAAELSAQYPALPVGMHFVLTFGRPLTAMPSLTDAN GELGKWLWQRAGAGTLDLNEIAQELECQFERFSAVFGRPPTHIDSHHHVHMLPQIYPLVAAFAREKSLPLRIDRHEVQQH GLTLDNPRSSEWFNAGFYGENLSEPSFLQLLEHADQQGVNSLEIMCHPAFIDQTLMTSGYCYPRLTELAILTSPTLKPAI AQRGYRLGSFLDC >Mature_253_residues MEKLLIVNADDFGLCKGQNYGIIDAFRNGVVSSTTAMMNSVDINHAAELSAQYPALPVGMHFVLTFGRPLTAMPSLTDAN GELGKWLWQRAGAGTLDLNEIAQELECQFERFSAVFGRPPTHIDSHHHVHMLPQIYPLVAAFAREKSLPLRIDRHEVQQH GLTLDNPRSSEWFNAGFYGENLSEPSFLQLLEHADQQGVNSLEIMCHPAFIDQTLMTSGYCYPRLTELAILTSPTLKPAI AQRGYRLGSFLDC
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family
Homologues:
Organism=Homo sapiens, GI63054868, Length=294, Percent_Identity=30.6122448979592, Blast_Score=107, Evalue=1e-23, Organism=Escherichia coli, GI1788028, Length=256, Percent_Identity=59.765625, Blast_Score=313, Evalue=9e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHBG_YERPE (Q8ZDA6)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AB0327 - RefSeq: NP_668578.1 - RefSeq: NP_993806.1 - RefSeq: YP_002347630.1 - ProteinModelPortal: Q8ZDA6 - SMR: Q8ZDA6 - IntAct: Q8ZDA6 - GeneID: 1146202 - GeneID: 1175512 - GeneID: 2765497 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO2682 - KEGG: ypk:y1255 - KEGG: ypm:YP_2484 - HOGENOM: HBG716502 - OMA: HATELSA - ProtClustDB: PRK02134 - BioCyc: YPES187410:Y1255-MONOMER - BioCyc: YPES214092:YPO2682-MONOMER - HAMAP: MF_01246 - InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 - Gene3D: G3DSA:3.20.20.370
Pfam domain/function: PF04794 YdjC
EC number: NA
Molecular weight: Translated: 28171; Mature: 28171
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLLIVNADDFGLCKGQNYGIIDAFRNGVVSSTTAMMNSVDINHAAELSAQYPALPVGM CCCEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHH HFVLTFGRPLTAMPSLTDANGELGKWLWQRAGAGTLDLNEIAQELECQFERFSAVFGRPP HEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC THIDSHHHVHMLPQIYPLVAAFAREKSLPLRIDRHEVQQHGLTLDNPRSSEWFNAGFYGE CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCCCCCCCCCCCCCCC NLSEPSFLQLLEHADQQGVNSLEIMCHPAFIDQTLMTSGYCYPRLTELAILTSPTLKPAI CCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHEECCCCCCHHH AQRGYRLGSFLDC HHCCCCCCCCCCC >Mature Secondary Structure MEKLLIVNADDFGLCKGQNYGIIDAFRNGVVSSTTAMMNSVDINHAAELSAQYPALPVGM CCCEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHH HFVLTFGRPLTAMPSLTDANGELGKWLWQRAGAGTLDLNEIAQELECQFERFSAVFGRPP HEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC THIDSHHHVHMLPQIYPLVAAFAREKSLPLRIDRHEVQQHGLTLDNPRSSEWFNAGFYGE CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCCCCCCCCCCCCCCC NLSEPSFLQLLEHADQQGVNSLEIMCHPAFIDQTLMTSGYCYPRLTELAILTSPTLKPAI CCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHEECCCCCCHHH AQRGYRLGSFLDC HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430