| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is nrdH [H]
Identifier: 218929728
GI number: 218929728
Start: 2979500
End: 2979736
Strand: Reverse
Name: nrdH [H]
Synonym: YPO2651
Alternate gene names: 218929728
Gene position: 2979736-2979500 (Counterclockwise)
Preceding gene: 218929731
Following gene: 218929727
Centisome position: 64.03
GC content: 44.73
Gene sequence:
>237_bases ATGAGCATTATTATTTACAGCAAACCTGACTGTGTCCAGTGTAATGCCACCTACCGGGCATTCGACAGACAAGGCATCTC ATATCAAATCATTGATTTAACAGAAGATGAACAGGCACTAAACCATGTCAAATCGTTGGGTTATCAGCAAGTTCCCGTGA TTGTGGCAGGAGATGAGCATTGGTCAGGCTTCCACCCGGATAAGATTAATGCACTGGTTCAGGCGGTCAGTGTTTGA
Upstream 100 bases:
>100_bases TACGCAGATGATAATCATAGGCCACCGTGGTACGTCATACGGACCCCATAGCAGCCTGAAGGGGATGATTTTCCTTTAAC ATAAAAGGTAAATACGAATC
Downstream 100 bases:
>100_bases TGAGGTCGATGACATGAATCCGCTGGTTTATTTCTCCAGCAGCTCGGAGAACTCCCATCGTTTTGTCGAAAAGTTACAAC TACCCGCCATCCGGATCCCT
Product: putative glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSIIIYSKPDCVQCNATYRAFDRQGISYQIIDLTEDEQALNHVKSLGYQQVPVIVAGDEHWSGFHPDKINALVQAVSV
Sequences:
>Translated_78_residues MSIIIYSKPDCVQCNATYRAFDRQGISYQIIDLTEDEQALNHVKSLGYQQVPVIVAGDEHWSGFHPDKINALVQAVSV >Mature_77_residues SIIIYSKPDCVQCNATYRAFDRQGISYQIIDLTEDEQALNHVKSLGYQQVPVIVAGDEHWSGFHPDKINALVQAVSV
Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1789028, Length=72, Percent_Identity=44.4444444444444, Blast_Score=80, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011909 - InterPro: IPR002109 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 8736; Mature: 8605
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIIYSKPDCVQCNATYRAFDRQGISYQIIDLTEDEQALNHVKSLGYQQVPVIVAGDEH CEEEEECCCCEEEECCEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCC WSGFHPDKINALVQAVSV CCCCCCHHHHHHHHHHCC >Mature Secondary Structure SIIIYSKPDCVQCNATYRAFDRQGISYQIIDLTEDEQALNHVKSLGYQQVPVIVAGDEH EEEEECCCCEEEECCEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCC WSGFHPDKINALVQAVSV CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]