Click here to switch to the map view.

The map label for this gene is yicN [H]

Identifier: 218929731

GI number: 218929731

Start: 2981533

End: 2981982

Strand: Reverse

Name: yicN [H]

Synonym: YPO2654

Alternate gene names: 218929731

Gene position: 2981982-2981533 (Counterclockwise)

Preceding gene: 218929747

Following gene: 218929728

Centisome position: 64.08

GC content: 42.22

Gene sequence:

>450_bases
ATGACGTGGATAATTATTGCTGTTTTGATCGTGGTTTTTATTGTGGGCTATCGTGTATTGACATCAGATACCCGCAAAGC
TATCGATACAATCTCTAACCTACTGAAAATAAAACCGATTTATATTGAATCGATGTTGCAAGAGATGGGGCCACGCCAAA
CGCAAATGTTTATTCGCTCCACCAGCAATGGCTCGGCAGAAGAGGTTAGAAAGGCAGCTTATTTAGTTTTTATTTATCAT
ACTTTTATCAAAAACCCTTCGGATGAAAATGTGGAGCTGTGGCGAAATACCCTGATCCGCGCACAGATCTCCCCTATTCT
GGCAGCAGAGCATACCGACGCCGCTTTGTTTTATTTTGCCGAACTGGATTTAGATGCCTTTGAATTGGCACAATTTCGGC
GTCATTATAATCTGCATTTTAATCCAGAACCCGGCACCCTGCTTCATTAG

Upstream 100 bases:

>100_bases
CAATTTAATAACTTATCGCAATTTAACAACTTATGGAAATTTAATAAGCCGATAGATTTACATTGCTAAATTCATCTTCT
ATGGCGTAAAGAAACCTTAA

Downstream 100 bases:

>100_bases
TGATGTTCTATTACCTACCCATTAGCATCGTGGATATGGCTGCATTATTATCTGATTTTCTCGCGACATCAGATAGGCAG
TCAGCCTTATCATGGCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYH
TFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH

Sequences:

>Translated_149_residues
MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYH
TFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
>Mature_148_residues
TWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHT
FIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082308, Length=146, Percent_Identity=32.1917808219178, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009587
- ProDom:   PD093913 [H]

Pfam domain/function: PF06711 DUF1198 [H]

EC number: NA

Molecular weight: Translated: 17229; Mature: 17098

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEC
TSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ELDLDAFELAQFRRHYNLHFNPEPGTLLH
ECCCCHHHHHHHHHHCCCEECCCCCCCCC
>Mature Secondary Structure 
TWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEC
TSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ELDLDAFELAQFRRHYNLHFNPEPGTLLH
ECCCCHHHHHHHHHHCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]