Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is leuS [H]
Identifier: 218929691
GI number: 218929691
Start: 2930913
End: 2933495
Strand: Reverse
Name: leuS [H]
Synonym: YPO2610
Alternate gene names: 218929691
Gene position: 2933495-2930913 (Counterclockwise)
Preceding gene: 218929693
Following gene: 218929690
Centisome position: 63.04
GC content: 51.06
Gene sequence:
>2583_bases ATGCAAGAGCAATACCGCCCAGAAGATATCGAAACGCAAGTACAGCTTCACTGGCAAGAGAAGCAAACCTTTAAAGTCAC TGAAGACGCCAGCAAAGAAAAATATTATTGCCTATCTATGCTGCCATACCCTTCAGGACGCCTGCATATGGGGCACGTTC GTAATTACACCATTGGCGACGTTATCTCTCGTTACCAGCGTATGTTGGGCAAAAACGTCTTGCAGCCAATTGGCTGGGAT GCGTTTGGCCTGCCCGCTGAAGGGGCTGCGGTAAAAAACAATACCGCCCCCGCACCTTGGACTTACGACAACATCGAATA CATGAAGAACCAGTTGAAATTACTGGGCTTCGGCTATGACTGGGATCGAGAAATTGCCACCTGCAAACCTGATTATTATC GTTGGGAGCAGTGGTTCTTCACCAAGTTGTATGAAAAAGGAATGGTCTACAAGAAGACCTCTGCGGTTAACTGGTGTCCA CACGATCTCACTGTGCTGGCTAACGAGCAGGTCATTGACGGCTGCTGCTGGCGTTGTGACACCAAAGTTGAACGTAAAGA GATCCCGCAGTGGTTTATCAAAATCACCGATTACGCTGAGCAGTTGCTCAACGATCTGGACACGCTGGAAAGCTGGCCAG AGCAGGTGAAAACCATGCAACGTAACTGGATTGGCCGCTCTGAAGGGGTCGATATCGTTTTCGACGTCGTGGATAGCGAA GAGAAACTGTCTGTTTATACCACCCGGCCAGACACCTTTATGGGCGTGACCTACGTAGCGGTTGCTGCTGGTCATCCTTT GTCATTGCAAGCGGCGGCGACTAATCCGGCCCTGGCTGATTTCGTTGCTGAATGCCGTAATACCAAGGTTGCCGAAGCTG AAATGGCAACCATGGAGAAAAAAGGCATGGCGACGGGTCTGTATGCCATCCATCCATTAACTGGCGAGAAACTGCCTATA TGGGCCGCTAACTTTGTCTTGATGGATTACGGTACTGGCGCAGTGATGGCCGTTCCGGGCCACGATGCACGTGACTGGGA ATTTGCCACCAAATATAACCTGCCAATCAAACCGGTTATTTTGGCCGCGGATGGCAGTGAGCCAGACTTGAGTCAGGAAG CCATGACCGAGAAAGGCACGCTGTTTAACTCTGGTGAGTTTGATGGCCTGAATCATGAAGATGGTTTTAATGCCATTGCC GATAAACTGGTCGCACTCGGTGTTGGGCAGCGCAAAGTAAACTATCGTCTGCGTGACTGGGGTGTTTCTCGCCAGCGTTA TTGGGGTGCCCCGATCCCAATGGTTACGTTGGAAGATGGGACTGTCGTTCCTACCCCAGAAGATCAACTGCCGGTTATCC TGCCAGAAGATGTGGTAATGGACGGTATTTCCAGCCCGATCAAGGCCGATCCTGAGTGGGCTAAAACCACCGTTAACGGT ATTCCGGGTCTGCGTGAAACCGATACCTTCGATACCTTTATGGAATCATCTTGGTATTACGCGCGCTACACCTGCCCGCA ATATGATGACGGTATGCTGGACCCCGCAGCCGCTAACTACTGGTTACCTGTCGATCAGTATGTTGGGGGCATTGAACATG CCATTATGCATCTGATGTATTTCCGCTTCTTCCACAAATTACTGCGTGACGCCGGTCTGGTGGACTCCGATGAACCCGCC AAACGCCTGTTATGTCAGGGGATGGTACTGGCTGACGCCTTCTATTACACCGGTAATAACGGTGAGCGTATTTGGGTTTC ACCGGTCGATGCGATTGTCGAACGTGATGACAAAGGCCGTATCGTTAAAGCTGTAGATGCGGAAGGCCATGAGCTGGTGT ACGCCGGCATGAGTAAAATGTCGAAATCGAAAAACAACGGTATCGACCCGCAAGTCATGGTAGAAAAATACGGCGCGGAT ACCGTACGTCTGTTTATGATGTTTGCCTCACCAGCAGAAATGACGCTGGAATGGCAGGAGTCGGGCGTTGAAGGGGCTAA CCGCTTCCTGAAGCGTGTTTGGCGTCTGGCCTTTGATCACACCGCGAAAGGTGCAGTGAAGCCACTGGATATTGCCAGCC TGACTGAAGAACAGAAATCCCTGCGTCGCGACCTGCATAAAACCATTGCGAAAGTGACCGATGATGTTGGCCGCCGTCAA ACCTTCAACACGGCAATTGCTGCTGTGATGGAGTTGATGAACAAGCTGGGCCGTGCACCTCAGGAAACGGAGCAAGACCG CGCACTGATGCAAGAAGCTTTACTGGCGGTAGTCCGGATGCTTTATCCATTCACCCCTCACGTCTGCTTCAGTTTGTGGC AAGCTTTGGGTGGAGAAGGCGATATCGATACTGCGCCGTGGCCAATTGCTGATGAACAAGCGATGGTTGAAGACTCTAAA TTAGTGGTCGTACAGGTCAATGGCAAAGTGCGTGGCAGAATTACAGTGCCCGCCGATGCCACTGAACAGCAAGTCCGTGA ACGCGCTGGTCAGGAGCACTTGGTGGCTAAATATCTGGATGGCGTTACTGTACGTAAAGTCATCTATGTCCCTGGCAAAT TGCTTAATCTGGTTGTGGGTTAA
Upstream 100 bases:
>100_bases CCTGCCGCTTATCAGCTATGCTATGCGGATCTCTCTTTATGATATGAAACAGATGATGCTACAGGCGTAGCTGTTTTTCA CTATAGGACCTCCGGCCGCC
Downstream 100 bases:
>100_bases GTCAAGGAGGCGTTGTGCGACATCGTATTCTGACGTTGTTGCTGGGGTTGGCGGTGCTGGTCACCGCTGGCTGCGGTTTT AATCTGCGGGGCACCACTCA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 860; Mature: 860
Protein sequence:
>860_residues MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCP HDLTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSE EKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADFVAECRNTKVAEAEMATMEKKGMATGLYAIHPLTGEKLPI WAANFVLMDYGTGAVMAVPGHDARDWEFATKYNLPIKPVILAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAIA DKLVALGVGQRKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDVVMDGISSPIKADPEWAKTTVNG IPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAGLVDSDEPA KRLLCQGMVLADAFYYTGNNGERIWVSPVDAIVERDDKGRIVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGAD TVRLFMMFASPAEMTLEWQESGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQ TFNTAIAAVMELMNKLGRAPQETEQDRALMQEALLAVVRMLYPFTPHVCFSLWQALGGEGDIDTAPWPIADEQAMVEDSK LVVVQVNGKVRGRITVPADATEQQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG
Sequences:
>Translated_860_residues MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCP HDLTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSE EKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADFVAECRNTKVAEAEMATMEKKGMATGLYAIHPLTGEKLPI WAANFVLMDYGTGAVMAVPGHDARDWEFATKYNLPIKPVILAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAIA DKLVALGVGQRKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDVVMDGISSPIKADPEWAKTTVNG IPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAGLVDSDEPA KRLLCQGMVLADAFYYTGNNGERIWVSPVDAIVERDDKGRIVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGAD TVRLFMMFASPAEMTLEWQESGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQ TFNTAIAAVMELMNKLGRAPQETEQDRALMQEALLAVVRMLYPFTPHVCFSLWQALGGEGDIDTAPWPIADEQAMVEDSK LVVVQVNGKVRGRITVPADATEQQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG >Mature_860_residues MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCP HDLTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSE EKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADFVAECRNTKVAEAEMATMEKKGMATGLYAIHPLTGEKLPI WAANFVLMDYGTGAVMAVPGHDARDWEFATKYNLPIKPVILAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAIA DKLVALGVGQRKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDVVMDGISSPIKADPEWAKTTVNG IPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAGLVDSDEPA KRLLCQGMVLADAFYYTGNNGERIWVSPVDAIVERDDKGRIVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGAD TVRLFMMFASPAEMTLEWQESGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQ TFNTAIAAVMELMNKLGRAPQETEQDRALMQEALLAVVRMLYPFTPHVCFSLWQALGGEGDIDTAPWPIADEQAMVEDSK LVVVQVNGKVRGRITVPADATEQQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=873, Percent_Identity=36.31156930126, Blast_Score=518, Evalue=1e-147, Organism=Homo sapiens, GI5454158, Length=379, Percent_Identity=25.065963060686, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1786861, Length=860, Percent_Identity=84.7674418604651, Blast_Score=1563, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=386, Percent_Identity=25.9067357512953, Blast_Score=116, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71997510, Length=846, Percent_Identity=29.3144208037825, Blast_Score=345, Evalue=8e-95, Organism=Caenorhabditis elegans, GI71997517, Length=846, Percent_Identity=29.6690307328605, Blast_Score=344, Evalue=9e-95, Organism=Caenorhabditis elegans, GI212645227, Length=436, Percent_Identity=27.5229357798165, Blast_Score=133, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17510661, Length=393, Percent_Identity=24.4274809160305, Blast_Score=102, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6323414, Length=812, Percent_Identity=35.9605911330049, Blast_Score=503, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6321531, Length=385, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6325217, Length=151, Percent_Identity=29.8013245033113, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355409, Length=884, Percent_Identity=33.5972850678733, Blast_Score=437, Evalue=1e-122, Organism=Drosophila melanogaster, GI281366294, Length=477, Percent_Identity=24.3186582809224, Blast_Score=84, Evalue=6e-16,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 97052; Mature: 97052
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGD CCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VISRYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLGFGYD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHEEEECCCC WDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCPHDLTVLANEQVIDGCCWRCD CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC TKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC EKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADFVAECRNTKVAEAEMATMEK CCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGMATGLYAIHPLTGEKLPIWAANFVLMDYGTGAVMAVPGHDARDWEFATKYNLPIKPVI CCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEE LAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAIADKLVALGVGQRKVNYRLRDW EEECCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCEEEHHC GVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDVVMDGISSPIKADPEWAKTTVNG CCCCHHCCCCCCCEEEECCCEECCCCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHCC IPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAAANYWLPVDQYVGGIEHAIMHLMY CCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHH FRFFHKLLRDAGLVDSDEPAKRLLCQGMVLADAFYYTGNNGERIWVSPVDAIVERDDKGR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHCCCCCCC IVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQE EEEEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHCCCCCEEEEHHH SGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFNTAIAAVMELMNKLGRAPQETEQDRALMQEALLAVVRMLYPFTPHVCFSLWQALGGEG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC DIDTAPWPIADEQAMVEDSKLVVVQVNGKVRGRITVPADATEQQVRERAGQEHLVAKYLD CCCCCCCCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHC GVTVRKVIYVPGKLLNLVVG CCEEEEEEECCHHHHHHHCC >Mature Secondary Structure MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGD CCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VISRYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLGFGYD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHEEEECCCC WDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCPHDLTVLANEQVIDGCCWRCD CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC TKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC EKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADFVAECRNTKVAEAEMATMEK CCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGMATGLYAIHPLTGEKLPIWAANFVLMDYGTGAVMAVPGHDARDWEFATKYNLPIKPVI CCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEE LAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAIADKLVALGVGQRKVNYRLRDW EEECCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCEEEHHC GVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDVVMDGISSPIKADPEWAKTTVNG CCCCHHCCCCCCCEEEECCCEECCCCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHCC IPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAAANYWLPVDQYVGGIEHAIMHLMY CCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHH FRFFHKLLRDAGLVDSDEPAKRLLCQGMVLADAFYYTGNNGERIWVSPVDAIVERDDKGR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHCCCCCCC IVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQE EEEEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHCCCCCEEEEHHH SGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFNTAIAAVMELMNKLGRAPQETEQDRALMQEALLAVVRMLYPFTPHVCFSLWQALGGEG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC DIDTAPWPIADEQAMVEDSKLVVVQVNGKVRGRITVPADATEQQVRERAGQEHLVAKYLD CCCCCCCCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHC GVTVRKVIYVPGKLLNLVVG CCEEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA