| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929571
Identifier: 218929571
GI number: 218929571
Start: 2784744
End: 2785196
Strand: Reverse
Name: 218929571
Synonym: YPO2482
Alternate gene names: NA
Gene position: 2785196-2784744 (Counterclockwise)
Preceding gene: 218929572
Following gene: 218929570
Centisome position: 59.85
GC content: 47.02
Gene sequence:
>453_bases TTGCCGCCGCTGAGGAGTACAAGGGGCAAAACTGTACAGGGTACCCAGCTTGACGGTGCGGTGATTGGCAGCACGGCGAC GGCCGATAAAAACACGCTGGATACCGGGACACTGGGCTTCAGTGATATCGATAATCAAGCCGATTTCAAGGTTGAACATC AAAGTGTCGGTATCAGTACCGGGGGGAATATCGGCAGTCAGTTTGTTGGCAATATGGCCAACGGCTTGCTGGTCGGGGCC AATAACGAAGGCCACGCCGACAGCACCACCCATGCGGCCGTTTCTGAAGGTATGAGAGCGGCTCTTTTAGATATCAGGGT TTTTATGATGTCTATTTATGGGGTTTTTTATCAATCAGTTGAAGATATTGACTTTTTTATCAGAGAGACAAAAGAATTTT CTTTCCCTGAAGACTATCAAGTTCCTGAACATTATAACTATCGTAGAGAATAA
Upstream 100 bases:
>100_bases AACTCAGTCGTGGAGAATAATGCGCTGAGTGACATAATCGAGAACAAAGTCTTTGGTGTGTCACAGGAAGAGAAGTACCA GAACGCGCAGATACAGGTCG
Downstream 100 bases:
>100_bases TGCGCTGGGTCTGGCTCTCAAGGGATGTGGTATCGCTGCACCCTGCCGAAGTCTGATAGCGAAGCAAGTTCTGGAGTTCG GTGTTAAAGCGGGTATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin/Hemagglutinin; Filamentous Haemagglutinin Outer Membrane Protein; Hemolysin; ShlA/HecA/FhaA Exofamily Protein; Adhesin/Hemagglutinin/Hemolysin; Hemolysin/Hemagglutinin-Like Protein; Filamentous Haemagglutinin; Contact-Dependent Inhibitor A; Haemolysin/Haemagglutinin; Adhesin/Haemagluttinin; Adhesin HecA Family; Filamentous Haemagglutinin Family Protein; Adhesin/Hemolysin; Hemagglutinin-Related Protein; Adhesin; Contact-Dependent Inhibition Of Growth Factor CdiA; Hemagglutinin/Adhesin Repeat-Containing Protein; Member Of ShlA/HecA/FhaA Exoprotein Family
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGA NNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
Sequences:
>Translated_150_residues MPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGA NNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE >Mature_149_residues PPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGAN NEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16362; Mature: 16231
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGIST CCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCC GGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSV CCCCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDIDFFIRETKEFSFPEDYQVPEHYNYRRE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGIST CCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCC GGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSV CCCCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDIDFFIRETKEFSFPEDYQVPEHYNYRRE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA