| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929570
Identifier: 218929570
GI number: 218929570
Start: 2783941
End: 2784486
Strand: Reverse
Name: 218929570
Synonym: YPO2481
Alternate gene names: NA
Gene position: 2784486-2783941 (Counterclockwise)
Preceding gene: 218929571
Following gene: 218929566
Centisome position: 59.83
GC content: 39.56
Gene sequence:
>546_bases TTGGACTACAAATCTATGAAAAAAGCACTTAAGGGGATATTTAGTGTCGCGATTGGTCTTGTCTTTTCAATCCAAGCCCA AGCTCAGATACTTATGGAACGCCAGCAGATTCCTGAACAGGGTATATCTCTCAATATTCCTAAAGGTTTTCTTCGTATGG ATGAGACGATGAAAAAATATAAATACCCTTCAGATAATCGCCCTCAAGTGGTTTTTACCAATGAGCGAGGGACGGTAAAC TTAGCTATGAGCGTGGGCATATTACCACTTAAGATTGAACAATTAGATGGTTATAAAGACTTGTTGTTACATGCGATGCG CAACTACCAACCAGCGGCAGAGAGTGTAATTGTAGATAAGGGCCAAAAGGCATGGCTGCTTAATTTTACCTCTAAGGCAA TAGATACAGATATTCATAATGTCATGCTAATAACTTCCTTTATGGACAGAGGCGTTATCATCGCATTTAACAGCACAGAA GAACTCTGGAATACCTACAGCGATTCAGCCAAAGCCTCCTTGTTATCAATAACGTTTGATAGATAA
Upstream 100 bases:
>100_bases GTTATGCTGACAATGATGGCGGGGAAGATCAGTCTGAATCGTTTCTTTTCCCTTAGACACTTTGTTGCATCATAATTGCC ATTAAATAAGCCTATTTATC
Downstream 100 bases:
>100_bases TCAACCTGATAATGACTGTATTCCCTAATCCAGTTGATGATCCCACCGGGGGTAAGCTGATAAATTCTGCGCCCGATCAA AACAAGGGAACAGCGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MDYKSMKKALKGIFSVAIGLVFSIQAQAQILMERQQIPEQGISLNIPKGFLRMDETMKKYKYPSDNRPQVVFTNERGTVN LAMSVGILPLKIEQLDGYKDLLLHAMRNYQPAAESVIVDKGQKAWLLNFTSKAIDTDIHNVMLITSFMDRGVIIAFNSTE ELWNTYSDSAKASLLSITFDR
Sequences:
>Translated_181_residues MDYKSMKKALKGIFSVAIGLVFSIQAQAQILMERQQIPEQGISLNIPKGFLRMDETMKKYKYPSDNRPQVVFTNERGTVN LAMSVGILPLKIEQLDGYKDLLLHAMRNYQPAAESVIVDKGQKAWLLNFTSKAIDTDIHNVMLITSFMDRGVIIAFNSTE ELWNTYSDSAKASLLSITFDR >Mature_181_residues MDYKSMKKALKGIFSVAIGLVFSIQAQAQILMERQQIPEQGISLNIPKGFLRMDETMKKYKYPSDNRPQVVFTNERGTVN LAMSVGILPLKIEQLDGYKDLLLHAMRNYQPAAESVIVDKGQKAWLLNFTSKAIDTDIHNVMLITSFMDRGVIIAFNSTE ELWNTYSDSAKASLLSITFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20485; Mature: 20485
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKSMKKALKGIFSVAIGLVFSIQAQAQILMERQQIPEQGISLNIPKGFLRMDETMKKY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHH KYPSDNRPQVVFTNERGTVNLAMSVGILPLKIEQLDGYKDLLLHAMRNYQPAAESVIVDK CCCCCCCCEEEEECCCCEEEEEEEECEEEEEEHHCCCHHHHHHHHHHCCCCCHHHHEECC GQKAWLLNFTSKAIDTDIHNVMLITSFMDRGVIIAFNSTEELWNTYSDSAKASLLSITFD CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEC R C >Mature Secondary Structure MDYKSMKKALKGIFSVAIGLVFSIQAQAQILMERQQIPEQGISLNIPKGFLRMDETMKKY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHH KYPSDNRPQVVFTNERGTVNLAMSVGILPLKIEQLDGYKDLLLHAMRNYQPAAESVIVDK CCCCCCCCEEEEECCCCEEEEEEEECEEEEEEHHCCCHHHHHHHHHHCCCCCHHHHEECC GQKAWLLNFTSKAIDTDIHNVMLITSFMDRGVIIAFNSTEELWNTYSDSAKASLLSITFD CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA