| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928994
Identifier: 218928994
GI number: 218928994
Start: 2120128
End: 2120268
Strand: Reverse
Name: 218928994
Synonym: YPO1875
Alternate gene names: NA
Gene position: 2120268-2120128 (Counterclockwise)
Preceding gene: 218928995
Following gene: 218928993
Centisome position: 45.56
GC content: 53.19
Gene sequence:
>141_bases ATGAGTGATTATCATCACGGCGCGCGCGTCATCGAAATCAACGACGGTACTCGCGTTATTTCCACTGTTTCCACCGCCAT TATCGGCATGGTCTGTACTTCCGATGATGCTGACCCCACCCTGCCCTCAGTGTCAGCATAG
Upstream 100 bases:
>100_bases TTTTCTCGTTGTGCCATTCGCCACCCAACCCTCATCAATCGCCACCCGCACAAATTGCCGTCACCATACTCTCTACCCTC AACCAGCAGAGAGTTAATCC
Downstream 100 bases:
>100_bases TTGTCACCCCCTTCTAAAAATGGATCCAGAGGGCAACGGAGTGACAAATAAAACGTATTTCCCCAGAACGTAAAGCCGGT GTATTGGCAAAATTACTTCC
Product: putative major tail sheath protein (partial)
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Prophage Tail Sheath
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA
Sequences:
>Translated_46_residues MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA >Mature_45_residues SDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4804; Mature: 4673
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA CCCCCCCEEEEEECCCCEEHHHHHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure SDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA CCCCCCEEEEEECCCCEEHHHHHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA