| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928993
Identifier: 218928993
GI number: 218928993
Start: 2119598
End: 2120044
Strand: Reverse
Name: 218928993
Synonym: YPO1874
Alternate gene names: NA
Gene position: 2120044-2119598 (Counterclockwise)
Preceding gene: 218928994
Following gene: 218928992
Centisome position: 45.56
GC content: 52.57
Gene sequence:
>447_bases TTGGCAAAATTACTTCCCCCGTACAACATGACCGTCACGGCTGTTGCACAGATGGAAGGGATATCGGAAGCTACCCTCTA CAATTGGCGCAATCAGGCTAAATCAGAGGGGGAACCGGTGCCCGGTGCAGAGAAAAACAGTGAACAGTGGCCTGCCGAAG CGCGGCTCGCGGTTATCGTGGAAACCGCCACGTTAAGTGAAACGGAAATCGCCGAATACTGCCGTAAAAAAGGGCTTTAC CCCGCGCAGATAGCGCAATGGAAACAGGCTTTTTTGCAGGTTCCTTCGGGTGACGATAAGGTGGCCCTCAAGCAAAGCCA GAAAGAAAACAAGCAACTGAAAAAGGAGCTGCTGCGTAAAGAAAAGGCGCTGGCGGAGACGGCAGCGATCCTTGTGTTAA GAAAAAAGCTCAGGGACTACTACGGGGAAACGGACGAGGACGACTGA
Upstream 100 bases:
>100_bases CCTCAGTGTCAGCATAGTTGTCACCCCCTTCTAAAAATGGATCCAGAGGGCAACGGAGTGACAAATAAAACGTATTTCCC CAGAACGTAAAGCCGGTGTA
Downstream 100 bases:
>100_bases CACCCCGAGAGGAACGCCAGCAGTTTATCGCGTGGATAAATGAGGCCGTCGCTGCTGGTGCACGCCGGGCGGTGGCCTGT CGCGAAGTTGAGCTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAKLLPPYNMTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIVETATLSETEIAEYCRKKGLY PAQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRKEKALAETAAILVLRKKLRDYYGETDEDD
Sequences:
>Translated_148_residues MAKLLPPYNMTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIVETATLSETEIAEYCRKKGLY PAQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRKEKALAETAAILVLRKKLRDYYGETDEDD >Mature_147_residues AKLLPPYNMTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIVETATLSETEIAEYCRKKGLYP AQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRKEKALAETAAILVLRKKLRDYYGETDEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16685; Mature: 16554
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLLPPYNMTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIV CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE ETATLSETEIAEYCRKKGLYPAQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRK ECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EKALAETAAILVLRKKLRDYYGETDEDD HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKLLPPYNMTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIV CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE ETATLSETEIAEYCRKKGLYPAQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRK ECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EKALAETAAILVLRKKLRDYYGETDEDD HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA