Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yidX [H]
Identifier: 218928806
GI number: 218928806
Start: 1910079
End: 1910780
Strand: Direct
Name: yidX [H]
Synonym: YPO1674
Alternate gene names: 218928806
Gene position: 1910079-1910780 (Clockwise)
Preceding gene: 218928805
Following gene: 218928807
Centisome position: 41.04
GC content: 44.02
Gene sequence:
>702_bases GTGATTAATTTTGTGAAGTTAATGTGTAATGTGAAGTTAATGTGTAAATGGGGGGCGATATTGATGTCACCCTTCTTTCT TTCTGCTTGCGTAACTAACCAGCTTTCAGATGATATCCGGGGCCATGAGAAAGGCTACACGCATTATAATGATGATATTA TTGTCGGCGTGTCTTTGGCTAAGCAGGGTGATAATAAAAACTGGGCATTTGTCGGTACGCATTTCGATTATGTGTTGTCA TCGGGAGCCGACGAGTTCTTAACGCTATTAGTTACCGGGCAGATTGATAAAAAGAAGATTGAGGTAGTCAGGGACGGTAG CTTTAATCTTAATAAGAAAAAGGATGGCTTCACAGGGAAAATCGCTCTGAAATATCGTTATCAGACGGCGGAAGAGCGAG GCAAAATAGAGCCGCTGATAAAAGGGGCTGATTGGAATTGTCCAAGCCTCACGGAAACAACGGGTATTTGCAATATTAAC CTGAATAATCTGGTCGGCACTATTCACAGAAAAGGTGCTACACCGGCCGATATCTTCCGTTTTGAACATCCTTTGCAAGT GAAGTTTTATAGTAAAAATACGACCTCAGCTAAGAGGGCGCTTTACCCGGTGGCCGTAGCGGCAGATGTCGTGATGTTGC CCGTGTATCTATTGAGTGCTGCTGCCGTGGCCGCTTTCTATGGTGTGGTCTCATTGAATTAG
Upstream 100 bases:
>100_bases CGACAGCGGACGTGGTACAAAGCGGGCAATAATCGCCATTTGTCTTACCGGAGCGTGCATCGACTGATGTGGGAAAATCA ATATACAGCAAGGAGTCAGT
Downstream 100 bases:
>100_bases TCGTTCTTTTTAAACCCGGCTAACAAAATAGAGAGGGGTAGCCTACCGGGCATTAAACACAACAGTGTCCGGTATCGCCC AATAATAATGTTTGGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MINFVKLMCNVKLMCKWGAILMSPFFLSACVTNQLSDDIRGHEKGYTHYNDDIIVGVSLAKQGDNKNWAFVGTHFDYVLS SGADEFLTLLVTGQIDKKKIEVVRDGSFNLNKKKDGFTGKIALKYRYQTAEERGKIEPLIKGADWNCPSLTETTGICNIN LNNLVGTIHRKGATPADIFRFEHPLQVKFYSKNTTSAKRALYPVAVAADVVMLPVYLLSAAAVAAFYGVVSLN
Sequences:
>Translated_233_residues MINFVKLMCNVKLMCKWGAILMSPFFLSACVTNQLSDDIRGHEKGYTHYNDDIIVGVSLAKQGDNKNWAFVGTHFDYVLS SGADEFLTLLVTGQIDKKKIEVVRDGSFNLNKKKDGFTGKIALKYRYQTAEERGKIEPLIKGADWNCPSLTETTGICNIN LNNLVGTIHRKGATPADIFRFEHPLQVKFYSKNTTSAKRALYPVAVAADVVMLPVYLLSAAAVAAFYGVVSLN >Mature_233_residues MINFVKLMCNVKLMCKWGAILMSPFFLSACVTNQLSDDIRGHEKGYTHYNDDIIVGVSLAKQGDNKNWAFVGTHFDYVLS SGADEFLTLLVTGQIDKKKIEVVRDGSFNLNKKKDGFTGKIALKYRYQTAEERGKIEPLIKGADWNCPSLTETTGICNIN LNNLVGTIHRKGATPADIFRFEHPLQVKFYSKNTTSAKRALYPVAVAADVVMLPVYLLSAAAVAAFYGVVSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994956, Length=227, Percent_Identity=29.5154185022026, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25795; Mature: 25795
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINFVKLMCNVKLMCKWGAILMSPFFLSACVTNQLSDDIRGHEKGYTHYNDDIIVGVSLA CCHHEEEHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEEE KQGDNKNWAFVGTHFDYVLSSGADEFLTLLVTGQIDKKKIEVVRDGSFNLNKKKDGFTGK CCCCCCCEEEEECHHHHHHHCCHHHEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEE IALKYRYQTAEERGKIEPLIKGADWNCPSLTETTGICNINLNNLVGTIHRKGATPADIFR EEEEEEECCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH FEHPLQVKFYSKNTTSAKRALYPVAVAADVVMLPVYLLSAAAVAAFYGVVSLN CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MINFVKLMCNVKLMCKWGAILMSPFFLSACVTNQLSDDIRGHEKGYTHYNDDIIVGVSLA CCHHEEEHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEEE KQGDNKNWAFVGTHFDYVLSSGADEFLTLLVTGQIDKKKIEVVRDGSFNLNKKKDGFTGK CCCCCCCEEEEECHHHHHHHCCHHHEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEE IALKYRYQTAEERGKIEPLIKGADWNCPSLTETTGICNINLNNLVGTIHRKGATPADIFR EEEEEEECCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH FEHPLQVKFYSKNTTSAKRALYPVAVAADVVMLPVYLLSAAAVAAFYGVVSLN CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]