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The map label for this gene is 218928639

Identifier: 218928639

GI number: 218928639

Start: 1699881

End: 1701143

Strand: Reverse

Name: 218928639

Synonym: YPO1498

Alternate gene names: NA

Gene position: 1701143-1699881 (Counterclockwise)

Preceding gene: 218928640

Following gene: 218928638

Centisome position: 36.55

GC content: 31.59

Gene sequence:

>1263_bases
ATGGATATAAAATTAGAAAAAAAGATAAATATCAACAGTAGAGAGAAAATAGTTATACTTTTCGTGTTGCTTATTCTATT
TTTAAGCTGTTTCTTTATTTATTATTTATTCACCAAAGAAAGCGCCCTGCTCGTTCCTCGAGAAAGAGCCATATTCTATA
CTGCTCAATTTGAGCCATATCAAGACGTATTGGTGACACGCGCCATTACGGTACCTAATGAAAGTGTTATTTTATCAAGT
GAAAGAGGAGGTAAGATTATTGAAATAGTCAAGCAATCTGCTGAAAATGTGATAAAAGGCGATGTGATTGCTCGATTATC
TAATTATGACTTCACACTAGAAGCCACATCCAGAATGGCGGATATTATGGAGCAAATAAATAGCCTCCGTAATATGAGAA
TGAGATTAGAACAAGATAGCAGAGATACTCAACTCAGTTTGCAAGAAGCTCAACACCAGATAGATATAATTTCTAAAGAT
TTGAGAAGATATAAAATACTTGACAAAAAATTCTTGATTGCAAAGTCTGAACTAGAACGACAGGCCGATAGACTAATAAA
TTGGAAAGTTAAGAGTGATATACTACAAAAACACAATAGTAGGAACCAAAAATCATTCCCTTCTCAATTTAAAAACATAG
ATGAATCTATTATATTACTTGAAAAAATGATGAAAATGATTGAAGTTGGCATTGAGCAACTCGTTATTATTGCACCTATT
GATGGTACATTATCTGTTCTTGATATTGAATTAGGTCAACAAATAAAATCAGGTGAAAAAATATCAGTAATAGACAATTT
AAATTCATATTATTTCAATGTTTATTTCAGTGAATATTATATCGATAAGATAAAACCTAATACTCAAATTATCGCACAGA
TAAATGGTCAAGATACTCAACTACTGATAGAGTCAGTATCAGCAATAGTAGACAATGGAAAATTCAAAGCAAAGCTTAGG
CCAATTGAATCAGGCATCGCTCATCTTAAACGAGGGCAATCTATTGAAATTCGTATTGCACTACAAGAAGAAAATAATCA
CGTACTATTAGTCCCAACTGAAAGTGTGTTTTCAAATAGCAATGGTGACCATTTTATATATATTTATCAAGATAAATATG
ACCGTGCAATTAAAACAAAAGTTGAAGTTAAACGTCGAAATTCGATTAAAACAGAGATCACATCTGGATTACAGCCAAGT
CAACGCATTGTAAAAATGCCTGATGATAGTGATAAAACAGCAAATATCATAGAGTTTAAATAA

Upstream 100 bases:

>100_bases
TACCTCTATGCCTTTGGATCACTTTTGCTGTTTATGGTGAGTCTCGTTAGTGTAATGACCTTGTCACTCATTTTATCGCA
TACCAAAAAGAATAAATAAC

Downstream 100 bases:

>100_bases
TATGCTACATTTACAGAATGCAAAAAAATATTACACAACAAAAGTCATAAAAACCAGAGTCCTAAATAATATAACGCTTT
CTGTAGAGAAAGGAGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; ABC Transporter Permease; Efflux Transporter Rnd Family Mfp Subunit; Efflux Transporter MFP Component RND Family; Efflux Transporter MFP Component RND Family Protein; Efflux Transporter; HlyD Family Secretion Protein; HlyD Family Transporter

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MDIKLEKKININSREKIVILFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPYQDVLVTRAITVPNESVILSS
ERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMADIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDIISKD
LRRYKILDKKFLIAKSELERQADRLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQLVIIAPI
DGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQINGQDTQLLIESVSAIVDNGKFKAKLR
PIESGIAHLKRGQSIEIRIALQEENNHVLLVPTESVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPS
QRIVKMPDDSDKTANIIEFK

Sequences:

>Translated_420_residues
MDIKLEKKININSREKIVILFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPYQDVLVTRAITVPNESVILSS
ERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMADIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDIISKD
LRRYKILDKKFLIAKSELERQADRLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQLVIIAPI
DGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQINGQDTQLLIESVSAIVDNGKFKAKLR
PIESGIAHLKRGQSIEIRIALQEENNHVLLVPTESVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPS
QRIVKMPDDSDKTANIIEFK
>Mature_420_residues
MDIKLEKKININSREKIVILFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPYQDVLVTRAITVPNESVILSS
ERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMADIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDIISKD
LRRYKILDKKFLIAKSELERQADRLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQLVIIAPI
DGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQINGQDTQLLIESVSAIVDNGKFKAKLR
PIESGIAHLKRGQSIEIRIALQEENNHVLLVPTESVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPS
QRIVKMPDDSDKTANIIEFK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48519; Mature: 48519

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLEKKININSREKIVILFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPY
CCEEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCH
QDVLVTRAITVPNESVILSSERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMA
HHHHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEHHHHHH
DIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDIISKDLRRYKILDKKFLIAKSELER
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QADRLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQLVIIAPI
HHHHHEECHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEEEC
DGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQINGQDTQ
CCCEEEEEEHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHH
LLIESVSAIVDNGKFKAKLRPIESGIAHLKRGQSIEIRIALQEENNHVLLVPTESVFSNS
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECHHHHCCC
NGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPSQRIVKMPDDSDKTANIIEFK
CCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCHHEEECCCCCCCCCCEEEEC
>Mature Secondary Structure
MDIKLEKKININSREKIVILFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPY
CCEEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCH
QDVLVTRAITVPNESVILSSERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMA
HHHHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEHHHHHH
DIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDIISKDLRRYKILDKKFLIAKSELER
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QADRLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQLVIIAPI
HHHHHEECHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEEEC
DGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQINGQDTQ
CCCEEEEEEHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHH
LLIESVSAIVDNGKFKAKLRPIESGIAHLKRGQSIEIRIALQEENNHVLLVPTESVFSNS
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECHHHHCCC
NGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPSQRIVKMPDDSDKTANIIEFK
CCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCHHEEECCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA