| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928640
Identifier: 218928640
GI number: 218928640
Start: 1701145
End: 1703505
Strand: Reverse
Name: 218928640
Synonym: YPO1499
Alternate gene names: NA
Gene position: 1703505-1701145 (Counterclockwise)
Preceding gene: 218928641
Following gene: 218928639
Centisome position: 36.61
GC content: 36.43
Gene sequence:
>2361_bases ATGCTTACGAGTGAATTTTTAAACGATGTAAAGCTCAGCCCCATGGCAACACTATTAGCCATTATTATAACCGCTATAGG GATGATCTCACTGTTTCTCGTATTACTGCTTTATTTAACTGATCATAGTATTGAAAAATTCCATCATGATTATCCACAAA TTTATCGAATAGAAACACAATTTAATCTGCCCAATGGTGAAAAAGTCAAATCGGCACAAGTCCCTTTGCCATTAATTACT GCATTACAAAATGAAAAAAACATCAAAGATGTCGCCTACGCTTTACGCTTGTTTATCGACTTACAGGTTAACGGTAAAAC ACAGGCTGACGTAGAAATTTATGCTGTTAGCCCTAATTTTTTAACGGCACTCAATCCCTATCGACAGAAAATACCTCATC TGTCACACAATGAAATTATCATTACGCCTGAGTTTAATCGCCAATATCTTCATTTAAATCACCCTAAAGGCCAGGTCATC ACGTTAGGAAAAAAAGGGAAATTCTTTATCAAAGATGTGGTTAACTTAAATACGTCCAGCCGCTTTAACACCCGCGCTGT CATTGCATTTTCTCCGGATATCATCGATGACTACCATGATAAAAGGCATGACTGGTACGATATGCACAGCTATCTCTTTG TCACCATGGTCGGCGGGGGAAAACCCACTCATGAGCAGTTAAAAACGCTGGTCACCCGGTATGCACCTCAACTCCCTGGC GCTCCGTTTAGCCCTGAAGAGTTTATTCAATTATCCGCCCGTAATATTACCGATATACATTATGATGCTGAACTCCCCGA TGAAATGAGCACAGTTATTTCAAAATCATATCTTTATACCTTGTATATGGCGGGTTTCTTTATCTTTTTAACCACCACCA TGAACTTTTTCAATGTTAATAACATCGTAAATAAAAACAAAAAAAGCAGTTTTCAGATAAAGAAATCGGTTGGTGCCTCT AATTATCAATTACTGACAGAGTCATTTTTCATCGCAACACTGCAAGCGGTGTGTGTCCTCACACTGGCGTTTATCTTCCT CTCAATTTTGATGCAAGCATCTGAAAATGTCAGGGAATTGATTTTAACGCAAGAAACAGGCCGGCTAATATCATCATTTT CTGTAGCGTTCTTCTCACTCTATATTGCGATATTAATTTCGCATTACCTCTATCTATCAACCTCAGTTTTCCCTAATAAG TCATGGCATAATCATGCTTATAGTGCACACCCAATATCACATTACATTTACCAAGTAACGTTATCTATACAAATAGCCAT AGCAGGGATCATTATTTATCTTTGGGCAGGCATAATGACACAAATAGATTTTATGCAGAGTCATATGTTTGGTTATGAAA AAGAAAATGTCGTGACATTTCCACTAAGCGATGAATTAAAATCTTTAACATCATTAAATAGCTTACAAGATGAATTAAAT AATAGCATAGGTATCTCCCCAATCGCATTGAGTAGTTGGCGACCATTTGATATGTCAAGAACGACGACTTCGGTTTTTCA TCAAAATCAGCAGGAGCAAGATAAACTCGTTTCCGTAAATATACTGAACGTGAACAAAAACTTCACCGACACTTGGGGAA TAAAAACATTAGCAGGCTACGAAAACCCTATTACACCCAGTAAAAATGATAATACTTATCATGCTATAGCGACAAAGACC TTTATGTCGGCGATGGGGAAATCATCAAGTGATGAGGTACTGAATACTCTTTTTTATATTAACGACAATGATGCTGAATA TACAGTTCGTATACTCAGGGTAGTTAATGACTTTTATCTTGCAGATCGAGATAAAAATACAACTCCATTGCTTATTCTCA TCAGTGATGAGGTGCAACGATATGGGGCACTGAAATTACATCATCAGAGTGATCTTAGTACCGTAAAAATGCTACTTGAA CGATATGGGGTCAATATTGACCAAATAAAACTTGCTGAACATATACACCAAGAATATTTTAATGATCATAATTTAATGAA AAAAACAATCAGCTTGGTTACCCTATTCTCAGTCATATTACTACTCATAAGCACCATGATCATCGGAATGGCCGAATCAA AAAGGATCAGTAAGATATTAAAAATAATGGAGTCAGTAGGTGGCTCTCTATATACACATATCATTTTCTTTATAAAGGAA AATATAACCCCCGTACTGGTTGCTATAGTAATAGCGTTCCCAATTGGTTTTATCCTATTACAAAAATGGCTGAGTAAATA TAACTTCATTAATAATCTCTCATACCTCTATGCCTTTGGATCACTTTTGCTGTTTATGGTGAGTCTCGTTAGTGTAATGA CCTTGTCACTCATTTTATCGCATACCAAAAAGAATAAATAA
Upstream 100 bases:
>100_bases GCTTTGCAGAAGACTAAGTCCATCAAGCATTTTAGACGTTATAAATAAAACAAAAATAATAATATCACTAAATATAATAA TCCCAGTGAGATATTCTTGT
Downstream 100 bases:
>100_bases CATGGATATAAAATTAGAAAAAAAGATAAATATCAACAGTAGAGAGAAAATAGTTATACTTTTCGTGTTGCTTATTCTAT TTTTAAGCTGTTTCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKE NITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK
Sequences:
>Translated_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKE NITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK >Mature_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKE NITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89595; Mature: 89595
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC >Mature Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA