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The map label for this gene is yafS [H]

Identifier: 218928249

GI number: 218928249

Start: 1227924

End: 1228643

Strand: Direct

Name: yafS [H]

Synonym: YPO1080

Alternate gene names: 218928249

Gene position: 1227924-1228643 (Clockwise)

Preceding gene: 218928246

Following gene: 218928251

Centisome position: 26.39

GC content: 46.67

Gene sequence:

>720_bases
ATGAAACCAGCGCAAATACGCCAAAATATTGAGACACCTGCATCTTGGGCTGAATTACCTTGGGGGGAATATTACCGCGC
GGCGCTTGAACAGCAACTGCAACCCTGGTGGCCAAAATTTTTTGGTTTTCACTTGCTGAAGGTTGGTCATTTAAGTGCTG
AAATTGCCAGCGATAAATGTGCGATTGCTCATCAGGTTAATGTCGGGGAGTGGGGCAAAAATATGCAGGTGCTCGCCAGT
CCTTATCAGTTACCCTTTGCTGAAAAATCGGTAGATGCTTGCTTACTTTCCCATACTTTGGCTTATGCCGCTAACCCGCA
CCGTATTCTACGTGAAGTCGATAGGGTATTAATTGATGATGGTTGGCTGGTTATCAGCGGTTTCAATCCATTCAGTTTGT
TAGGCTTGGGAAAATTGGTGCCGGTATTACGTCAGCGACAGCCATACATCAGCCGGATGTTTACTCAAATGCGTTTGCTG
GATTGGCTGAGTTTGCTGAATTATGAAGTAGTACATTTATCGTGCTTTCACGTTTTGCCCTTCAATAAGAACGGTGGGCA
CTTTATCAGTACCCACCTGCCTGCGTTGGGATGTGTCAATCTAATTATTGCCCGGAAACGCACGGTGCCATTGACGTTCA
ATCCGATGAAGTTCGGCGTACGTAAACCTTGGTTTAGCCGGGCCGTTGGTGCAACAAAAAGTTACCGGGATCAACCCTGA

Upstream 100 bases:

>100_bases
TTAGCCAGTAGCCAAATGTAATTGTCTTGAAATGCCGGAATGCTGATAAGATTCATTAGATACCTCTCGTTGGCAACAGC
TTGAAAGAAGATAATAAAAT

Downstream 100 bases:

>100_bases
GTCAAGTCAATCATTCGAATGAGTAAGAGCCGCTAACACGCCAAGCTAGTAGGATTAATCAGGGTTATAGCCCGTATCAT
CGAGTGTCGGTGAATTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKPAQIRQNIETPASWAELPWGEYYRAALEQQLQPWWPKFFGFHLLKVGHLSAEIASDKCAIAHQVNVGEWGKNMQVLAS
PYQLPFAEKSVDACLLSHTLAYAANPHRILREVDRVLIDDGWLVISGFNPFSLLGLGKLVPVLRQRQPYISRMFTQMRLL
DWLSLLNYEVVHLSCFHVLPFNKNGGHFISTHLPALGCVNLIIARKRTVPLTFNPMKFGVRKPWFSRAVGATKSYRDQP

Sequences:

>Translated_239_residues
MKPAQIRQNIETPASWAELPWGEYYRAALEQQLQPWWPKFFGFHLLKVGHLSAEIASDKCAIAHQVNVGEWGKNMQVLAS
PYQLPFAEKSVDACLLSHTLAYAANPHRILREVDRVLIDDGWLVISGFNPFSLLGLGKLVPVLRQRQPYISRMFTQMRLL
DWLSLLNYEVVHLSCFHVLPFNKNGGHFISTHLPALGCVNLIIARKRTVPLTFNPMKFGVRKPWFSRAVGATKSYRDQP
>Mature_239_residues
MKPAQIRQNIETPASWAELPWGEYYRAALEQQLQPWWPKFFGFHLLKVGHLSAEIASDKCAIAHQVNVGEWGKNMQVLAS
PYQLPFAEKSVDACLLSHTLAYAANPHRILREVDRVLIDDGWLVISGFNPFSLLGLGKLVPVLRQRQPYISRMFTQMRLL
DWLSLLNYEVVHLSCFHVLPFNKNGGHFISTHLPALGCVNLIIARKRTVPLTFNPMKFGVRKPWFSRAVGATKSYRDQP

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=236, Percent_Identity=63.5593220338983, Blast_Score=320, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27289; Mature: 27289

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAQIRQNIETPASWAELPWGEYYRAALEQQLQPWWPKFFGFHLLKVGHLSAEIASDKC
CCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
AIAHQVNVGEWGKNMQVLASPYQLPFAEKSVDACLLSHTLAYAANPHRILREVDRVLIDD
CEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GWLVISGFNPFSLLGLGKLVPVLRQRQPYISRMFTQMRLLDWLSLLNYEVVHLSCFHVLP
CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
FNKNGGHFISTHLPALGCVNLIIARKRTVPLTFNPMKFGVRKPWFSRAVGATKSYRDQP
ECCCCCEEEEHHCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPAQIRQNIETPASWAELPWGEYYRAALEQQLQPWWPKFFGFHLLKVGHLSAEIASDKC
CCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
AIAHQVNVGEWGKNMQVLASPYQLPFAEKSVDACLLSHTLAYAANPHRILREVDRVLIDD
CEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GWLVISGFNPFSLLGLGKLVPVLRQRQPYISRMFTQMRLLDWLSLLNYEVVHLSCFHVLP
CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
FNKNGGHFISTHLPALGCVNLIIARKRTVPLTFNPMKFGVRKPWFSRAVGATKSYRDQP
ECCCCCEEEEHHCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]