Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is yaeQ [H]
Identifier: 218928234
GI number: 218928234
Start: 1208807
End: 1209355
Strand: Direct
Name: yaeQ [H]
Synonym: YPO1065
Alternate gene names: 218928234
Gene position: 1208807-1209355 (Clockwise)
Preceding gene: 218928231
Following gene: 218928235
Centisome position: 25.98
GC content: 45.9
Gene sequence:
>549_bases ATGGCACTAAAAGCAACTATCCATAAAGCCGCTATTAACATTGCAGATATGGACCGTAATTTTTTCCAGGATATTAACCT GACGATAGCGCAACATCCCTCGGAAACGGATCAACGTATGATGCTGCGTTTACTGGCATGGATTTGCCATGCTGATGAGC GCTTGCTGTTTACCAAAGGACTCAGTGCTGATGATGAACCCGAAGTTTGGCGCCATAATGACCACAACGGCATTGAGCTG TGGATTGAATTGGGGCTACCTGAAGAGAAACGGTTGCGCAAAGCCTGTAATCAATCAAAACAAGTCGTTCTGTATGCATA CAGTGAGCGTGCGGCCAAAGTCTGGTGGCCACAAGTTCAGGAGAAACTCGCTGGGCATCGTAACTTAAGAGTGCGTTTTC TTGATGACGAACAAATGGCGAAGTTGGCTGCGCTGTCTAACCGCAATATGTCATTACAGGCGACACTGCAAGAAGGGACT ATCTGGCTATCAGATGTACAGAATAATCTGGAAATTAGTTTTGCCGAATGGCAAAACTACGGGCAATAA
Upstream 100 bases:
>100_bases TTGGTATTGATACCACTTATATCCTTCTTTCTGTATGGTTCGCTGTCTGCTGGCAGGTCTAATCAAGTACACTGTTAGCC AGATAATTCAGAGGTCACCC
Downstream 100 bases:
>100_bases GTGTGTTGATTATCTCTAATAGTGTCACGCTGGCCAGCGGCGAGATTGAGCTGACCGCGATCCGGGCGCAGGGCGCTGGA GGCCAGCATGTTAATAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MALKATIHKAAINIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLLFTKGLSADDEPEVWRHNDHNGIEL WIELGLPEEKRLRKACNQSKQVVLYAYSERAAKVWWPQVQEKLAGHRNLRVRFLDDEQMAKLAALSNRNMSLQATLQEGT IWLSDVQNNLEISFAEWQNYGQ
Sequences:
>Translated_182_residues MALKATIHKAAINIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLLFTKGLSADDEPEVWRHNDHNGIEL WIELGLPEEKRLRKACNQSKQVVLYAYSERAAKVWWPQVQEKLAGHRNLRVRFLDDEQMAKLAALSNRNMSLQATLQEGT IWLSDVQNNLEISFAEWQNYGQ >Mature_181_residues ALKATIHKAAINIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLLFTKGLSADDEPEVWRHNDHNGIELW IELGLPEEKRLRKACNQSKQVVLYAYSERAAKVWWPQVQEKLAGHRNLRVRFLDDEQMAKLAALSNRNMSLQATLQEGTI WLSDVQNNLEISFAEWQNYGQ
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=178, Percent_Identity=61.7977528089888, Blast_Score=242, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 21199; Mature: 21068
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKATIHKAAINIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLLFTKG CCCHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC LSADDEPEVWRHNDHNGIELWIELGLPEEKRLRKACNQSKQVVLYAYSERAAKVWWPQVQ CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHCCHHHH EKLAGHRNLRVRFLDDEQMAKLAALSNRNMSLQATLQEGTIWLSDVQNNLEISFAEWQNY HHHCCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEHHHCCC GQ CC >Mature Secondary Structure ALKATIHKAAINIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLLFTKG CCHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC LSADDEPEVWRHNDHNGIELWIELGLPEEKRLRKACNQSKQVVLYAYSERAAKVWWPQVQ CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHCCHHHH EKLAGHRNLRVRFLDDEQMAKLAALSNRNMSLQATLQEGTIWLSDVQNNLEISFAEWQNY HHHCCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEHHHCCC GQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]