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The map label for this gene is yaeJ [H]

Identifier: 218928235

GI number: 218928235

Start: 1209358

End: 1209774

Strand: Direct

Name: yaeJ [H]

Synonym: YPO1066

Alternate gene names: 218928235

Gene position: 1209358-1209774 (Clockwise)

Preceding gene: 218928234

Following gene: 218928236

Centisome position: 25.99

GC content: 49.4

Gene sequence:

>417_bases
GTGTTGATTATCTCTAATAGTGTCACGCTGGCCAGCGGCGAGATTGAGCTGACCGCGATCCGGGCGCAGGGCGCTGGAGG
CCAGCATGTTAATAAAACCTCAACTGCGATTCATTTGCGCTTTGACATTAAGGCCTCAAGCCTGCCAGAGTATTATAAAG
AAAGGTTATTGTTGCTAAATAGCCATTTGGTGACAGCTGAAGGTGTTGTCATCATAAAAGCACAGGAATACCGCAGCCAA
GATATGAACCGTGAGGCTGCATTGGCGCGCTTGGTAGCACTCATTCGCCAGGCAATGGTGGTAGAAAAGGCCCGTCGAGC
GACAAAACCAACCAAAGGTTCAAAAATCAGGCGAGTTGAGGGTAAAGTCCGCAAAGGGGCGACAAAAGCGCTGCGTGGTA
AAATACATCAAGAGTGA

Upstream 100 bases:

>100_bases
CATTACAGGCGACACTGCAAGAAGGGACTATCTGGCTATCAGATGTACAGAATAATCTGGAAATTAGTTTTGCCGAATGG
CAAAACTACGGGCAATAAGT

Downstream 100 bases:

>100_bases
AGTCGATATTTATATGAACGTTGATACATTGCGGTTGATATGACTTCATTCCATATATATCGGACACAGTATGGGAGAAT
CACTGTGAGTAAATTAACGA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVIIKAQEYRSQ
DMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE

Sequences:

>Translated_138_residues
MLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVIIKAQEYRSQ
DMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE
>Mature_138_residues
MLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAEGVVIIKAQEYRSQ
DMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=65.9259259259259, Blast_Score=192, Evalue=7e-51,
Organism=Drosophila melanogaster, GI19921098, Length=91, Percent_Identity=37.3626373626374, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15241; Mature: 15241

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLN
CEEECCCEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
SHLVTAEGVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVE
CCEEEECCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
GKVRKGATKALRGKIHQE
HHHHHCHHHHHHCCCCCC
>Mature Secondary Structure
MLIISNSVTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLN
CEEECCCEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
SHLVTAEGVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVE
CCEEEECCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
GKVRKGATKALRGKIHQE
HHHHHCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]