Click here to switch to the map view.

The map label for this gene is aguA [H]

Identifier: 218928111

GI number: 218928111

Start: 1030324

End: 1031439

Strand: Direct

Name: aguA [H]

Synonym: YPO0939

Alternate gene names: 218928111

Gene position: 1030324-1031439 (Clockwise)

Preceding gene: 218928110

Following gene: 218928113

Centisome position: 22.14

GC content: 52.6

Gene sequence:

>1116_bases
ATGTCGGTGCAAGACACGATGTTACAACAACAGGCATTACCCGGCACACCGCGGCAGGATGGTTTCTTTATGCCTGCAGA
ATGGGCACCGCAGGATGCGGTATGGATGCTTTGGCCATATCGTCAGGATAACTGGCGCGGCAAAGCTATTCCCGCTCAGC
AGACATTCGCCAAAGTCGCCGAGGCCATTAGCCGTGCTACGCCAGTCTTTATGGGCGTTCCCGCCGAGTTTATGGCACAA
GCCAAGGCAACCATGCCGGCGAATGTGACCTTAGTGGAAATGGCCAGTGACGATGCCTGGATGCGTGATACAGGCCCAAC
GATGGTGATTAATGGTGCGGCCGAGCGCCGGGCCGTTGACTGGCAGTTTAATGCATGGGGCGGCCTGAACGGTGGCTTGT
ATGCTGACTGGCAACAAGATGAAAAAGTTGCCGTTCAAGTCAGTGATTTTCTGAAAAACGCGCATTACAGTGCACCGTTG
ATACTGGAAGGTGGCTCCATTCATACTGATGGCGAAGGCACGTTACTCACCACTGCTGAATGTTTGCTAAACCCGAATCG
CAACCCACATTTGAATCAAGCGCAAATCGAACAGTTACTGTGTGACTATCTGGGGGTGACTCACTTCATTTGGTTGCAAG
ATGGCGTGTATAACGATGAGACCGATGGTCATATCGATAATATGTGCTGTTTTGTCCGCCCAGGCGAAGTAGCCCTGCAT
TGGACAGACGACCAGCAGGATCCACAGTATGCACGTTCAGTCGCAGCGTTCGAGGTGTTATCCAATACCGTCGATGCCAA
AGGGCGTAAACTGAAAATCTGGAAGTTACCGGCTCCCGGCCCGCTTTATAACACGGAAGAGGAAACCTTCGATGTGTTGA
CCAGCGATGCGGTTCCCCGCACGGCGGGTGAACGCCTGGCGGGCTCTTATGTCAACTTCCTGATCAGTAACCAGCAAATT
ATTTTCCCACTGCTGGATAGCCGCACTGACGGGCAGGCTAACGATCTGTTACAACAAATGTTCCCCGGCTATGCAATTGT
CGGCGTGCCTGCCAGAGAGATTTTACTCGGTGGCGGTAACATACATTGCATTACTCAGCAGATCCCAGCGGCTTAA

Upstream 100 bases:

>100_bases
GATCGCCGCCCAACGTGCTTCATGGGGCTTGTTCCGTGATCGCCGCCCAGAGATGTACCAAACATTAGCCACGTCAGACG
GCAAGACCCGGAGATAATTT

Downstream 100 bases:

>100_bases
TCCGCACAAAAATAAGCCGCCTGCTTGACCCGGATCATCCGATCCGGGTTAATTTATTGCATCACCTTCTCCCTTGAAAT
AACTACAGTGTCAGCGGTGC

Product: agmatine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase [H]

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSVQDTMLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQ
AKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPL
ILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALH
WTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQI
IFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA

Sequences:

>Translated_371_residues
MSVQDTMLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQ
AKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPL
ILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALH
WTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQI
IFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA
>Mature_370_residues
SVQDTMLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQA
KATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLI
LEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHW
TDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQII
FPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017754
- InterPro:   IPR007466 [H]

Pfam domain/function: PF04371 PAD_porph [H]

EC number: =3.5.3.12 [H]

Molecular weight: Translated: 41039; Mature: 40907

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQDTMLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVA
CCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
EAISRATPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVD
HHHHHCCCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEE
WQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAE
EEEECCCCCCCCEEECCCCCCEEEEEHHHHHHCCCCCCCEEEECCEEEECCCCCEEEEEH
CLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALH
HHCCCCCCCCCCHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEE
WTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPR
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCC
TAGERLAGSYVNFLISNQQIIFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGN
CHHHHHHHHHHHHEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHEEECCCC
IHCITQQIPAA
EEEEECCCCCC
>Mature Secondary Structure 
SVQDTMLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVA
CHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
EAISRATPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVD
HHHHHCCCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEE
WQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAE
EEEECCCCCCCCEEECCCCCCEEEEEHHHHHHCCCCCCCEEEECCEEEECCCCCEEEEEH
CLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALH
HHCCCCCCCCCCHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEE
WTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPR
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCC
TAGERLAGSYVNFLISNQQIIFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGN
CHHHHHHHHHHHHEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHEEECCCC
IHCITQQIPAA
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA