Click here to switch to the map view.

The map label for this gene is yggE [H]

Identifier: 218928090

GI number: 218928090

Start: 1006627

End: 1007406

Strand: Reverse

Name: yggE [H]

Synonym: YPO0917

Alternate gene names: 218928090

Gene position: 1007406-1006627 (Counterclockwise)

Preceding gene: 218928091

Following gene: 218928088

Centisome position: 21.65

GC content: 49.49

Gene sequence:

>780_bases
GTGAAGTTGAAGACATTGGCTTTGGCCGCAATGATAGGATTAGGGACGTTACCTTTGGCGCTGCAAGCTCAAGCGGCCGA
AGTGCCAGAAGGGCCGCATGTTGTCACCTCAGGTACCGCCAGCGTTGAGGCAACCCCAGATATCGCGACTATCGCAATTG
AAGTCAGTGTATCTGCCAAAGATGCTGCAGATGCCAAAAAGCAGGTCGATACCCGCGTCGCGCAATACTTTGATTTCCTA
AATAAAAGTGGCATTGAAAAGAAAGATGTCAAGGCCGCTAATATTCGTACCCAGCCTGAATATGACTACCAGAAAAGCGG
TGAAGCCGTATTGAAAGGTTACCGTGCTGTGCGTCAGGTTCAGGTGACATTGCGCCAGTTGGATAAATTAAATGATTTGC
TGGATGGTGCGTTGAAATCGGGTCTGAATGAGATCCGTGCCGTTGAGTTGGGTGTTGCCAGCCCAGAAACCTACCGTGAG
CAGGCGCGTAAAAAAGCCATTGAGAATACGATTACGCAGGCCGGCGCACTGGCCGATGGATTTAAAGTTAAATTAGGCCC
GGTTTATAGCATTCGTTACCATATAGCGAATTACCAGCCAATGCCGGTAGCTCGAATGTATAAAAGTGCTGGAGCGGCAT
CCGACACGGCGGTGGAGCAAACCTACGAACAACAGACCATCAATTTTGATGATCAGGTTGATGTGGTCTTTGAGCTGCAA
ACGGGAGCCAACCCGGCATCGATCGCAGCTACTGCCAATAAAACAGTTGCTGCTCAGTAA

Upstream 100 bases:

>100_bases
CGGCGAATGAATCGCGATGTTAATGGAATTTCAGTGAGTGTCGTGCACTGATTCTCTGACAGGTGCAGGTTCATTTGTCA
TGCATATCTTAGGAGGCACC

Downstream 100 bases:

>100_bases
ACATAAACAGCTACTGCCCAATAAACGAGTCCTGTCGTAATACCTGACGCCCGTAGGATAAGAGGGCGTCAGTAACCTTT
CTCATGGTCCGGCTTTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRVAQYFDFL
NKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYRE
QARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQVDVVFELQ
TGANPASIAATANKTVAAQ

Sequences:

>Translated_259_residues
MKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRVAQYFDFL
NKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYRE
QARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQVDVVFELQ
TGANPASIAATANKTVAAQ
>Mature_259_residues
MKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRVAQYFDFL
NKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYRE
QARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQVDVVFELQ
TGANPASIAATANKTVAAQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=240, Percent_Identity=63.75, Blast_Score=295, Evalue=3e-81,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAK
CCHHHHHHHHHHHCCCCCHHEEHHHHCCCCCCEEEECCCCCEECCCCEEEEEEEEEECCC
DAADAKKQVDTRVAQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
QVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYREQARKKAIENTITQAGALADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
FKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQVDVVFELQ
CEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC
TGANPASIAATANKTVAAQ
CCCCCHHEEEECCCCCCCC
>Mature Secondary Structure
MKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAK
CCHHHHHHHHHHHCCCCCHHEEHHHHCCCCCCEEEECCCCCEECCCCEEEEEEEEEECCC
DAADAKKQVDTRVAQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
QVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYREQARKKAIENTITQAGALADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
FKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQVDVVFELQ
CEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC
TGANPASIAATANKTVAAQ
CCCCCHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086 [H]