Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928044
Identifier: 218928044
GI number: 218928044
Start: 955022
End: 955738
Strand: Reverse
Name: 218928044
Synonym: YPO0869
Alternate gene names: NA
Gene position: 955738-955022 (Counterclockwise)
Preceding gene: 218928045
Following gene: 218928043
Centisome position: 20.54
GC content: 51.6
Gene sequence:
>717_bases ATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCCCATGATTATCAGGCGTTTTG GTTGTGGTCAGGTGTGAACCCACAGCCCGCTTTACAGCAGGCGAATCAGGTTTATCTGCATCAGGGGGAAGTGGTTATTC GCCAGCGAGCCGCCTGGTTTCAGAAAATGGGGCTACCCAGCTCTAGGCTGACACTGCCTGCGATGTGGGTCACGGTGCGC ATCACCACGTTGGATGTACCAGATGATATTTTGGCGATTCTGATTGATTTACCCCGGCGGTGGGCCGCCGCTGGAAATCA GGTCATCGGGCTACAGATTGATTTTGATGCAGGCACCTATCGTCTTGATGATTACGCTGGGTTCCTGCGCCGGGTGCGCA CTAAGCTGGATCCAAATTTTGCACTTGGTGTAACCGGCTTATTGGACTGGGCAAAAACCGGTAGCATCCAGCAGCTCAAT GCGTTGCCGATTGATGAACTGGTGATACAAACCTATCAGGGGCGATCAACCGTTAATCAGTACTCACGTTACTTACCCGC CTTGCTGCAATTACGTCTTCCCTTCAAGATTGGTTTGGTTCAACACGGGGAGTGGGATCCGCAATGGGAACAGTATCTGG CTGCTTCCCCTTTTTATCGGGGAGAAGTCGTCTTTTTGCTTAATCATCTTCGCTCTGAACCTGCTAACGGTAAATAA
Upstream 100 bases:
>100_bases CACGTAAGCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGTAGCCGATGGGCAGAACGGCTCAACTATTACTGGTAA GCTGCCTATTAGCGCTATTT
Downstream 100 bases:
>100_bases TTTTGAACATTTCCGTCGTCACCAATGTGGCCGTGCATTTCTATAAGTGCCAAGTTGCCAAACCTTGTTGCCCAAAGGGA AATAGTTGAGAGAGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVR ITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLN ALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVVFLLNHLRSEPANGK
Sequences:
>Translated_238_residues MPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVR ITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLN ALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVVFLLNHLRSEPANGK >Mature_237_residues PPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVRI TTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNA LPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVVFLLNHLRSEPANGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27067; Mature: 26936
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWF CCCCHHHHHHHHHHHHHHEEECCEEEEEECCCCCCHHHHHCCEEEEECCCHHHHHHHHHH QKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTY HHHCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHCCHHHHHCCCEEEEEEEEECCCCE RLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQ EEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHH YSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVVFLLNHLRSEPANGK HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure PPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWF CCCHHHHHHHHHHHHHHEEECCEEEEEECCCCCCHHHHHCCEEEEECCCHHHHHHHHHH QKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTY HHHCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHCCHHHHHCCCEEEEEEEEECCCCE RLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQ EEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHH YSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVVFLLNHLRSEPANGK HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA