Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928045
Identifier: 218928045
GI number: 218928045
Start: 955759
End: 958083
Strand: Reverse
Name: 218928045
Synonym: YPO0870
Alternate gene names: NA
Gene position: 958083-955759 (Counterclockwise)
Preceding gene: 218928046
Following gene: 218928044
Centisome position: 20.59
GC content: 45.68
Gene sequence:
>2325_bases TTGATTAACGGTATGTTTTTATTCGTGGCAGCAGTATCCGATATTCATCTTGGATTTCAGTGCTTTCTTGTTCTTTTTGC TGAAAATATAAGCGACAATGTCGGATTTCCTGAAGGGTGCCAAGCGAGAATGAAAATAAACAGTAAGTTATGGATGGGCC TCCTAATGGGCATGCTAGGTATGGCGGTACCTCCATCACAGGCTTCTTCTGATAATACTGGCTGTGTGTGGGGAAAATAT TGCCCGCTCAGTGGTGTACCCTTTTTGGATGTTTACAATGATACTCGGGTTAATATGATGTTATTGGTTGGAGAACCAAA AAATTTCATATTGCCACGTTTAACGATGCCAGCGGATATTACCCGTAGTAGGAATTACCATTTTGGTGAGTTTTATTATG ATGAAATGAGTTTTCCGAAGCGGGAAAAAAGTCTTACAGATGAGAATAATGATAGCCCTTCGGAAGAAACGCCATTTGAT AAGATGGCAAAGACGCTAGGCATCAATTCGGCTTCGTTTAAGGGAACCAATGCCCGATATAGAGAAGCACGGCATATCTC CAATAATCCCGCATCAGTTGAGCAATTTTTTACCGCTTTACTGGCAGACTCGTCCTTAACTGCCGACGATCGACATAATT TAGCCCTCTGGCGATCCAATATTTTTCATAATGTCGATGCACCGGTCGATGGTGGAATTACACCGCCACCTTTTAACATT GTGCCAGGCTCACATGTTGATGCTTTTAGCGATTATCTTCATGGCGCCAATGCATTTTATCGGGGCGATTACCCAGAGGC CACCGCTTTATTTTCTGCCCTCCAAAAGAGTTCTCAAGCATGGGTCGCAGAAACAGCGACTTATATGTTGTTCCGAGTTG CGCTCAATGAGAGCAGTACAAATGCGTCGGATAAATATGGCATGTTTGAAACTAAAAATATCAATCAGGATGCCGCCCGT CAGGCATTGGATTATTCTCGGGCCTATTTAGTTGCTTATCCCCAAGGCATTTACGCAGAGTCGATTCAGGGGTTGGAGCG CCGTATTTACTGGTACCTCTCTGATTGGCAACAACTGGCGCGGCTGTATGAAGAGACATTACTGGCAGCACCGAATGCTG AAGCTTTGTGGGATACCGTATCAGAAGTTGATGCTAAATTTATCAGCAAAGATGCCTTTGGTGGCGAGCCCTTTATCAGC GATATGCAAGCACCTTTACTGACCTTCACGCAAACATTACGTTGGTTGCGATTAGGGGGGCGCCAGAGTGGCTCTGAGTT GGAGGTTACGCAGGAGAAACTGGCAAGTTATAAACCGATGTTTGTCGATGCGGATAGGCTCCCCCTTTGGCAGTATCTAC AGACGGCCTGGCTCTATTATCATGAGCAAGATTATGCCGGTGTCGTCGCCACTGTCTCGGCTGTCGACTCTCTGCCAGCC ACTGACATTGTGACCTTCAGTCAACAGATTCTATATGGTGATGCATTGGTGGCTCAACAACAATGGTCACAGGCCGAAGC ACATTGGCGCAAGCTGCTGGGCCTGGTGCAATCGCCGCAACAACAGCAATATCTGCAACTCAAACTCGCCGCGGTTCTGG TGAACAGTGATCAAATTGAAGCCATATTTACCGCAGATAGCCCAATCAAAAACCTGCGTTATCGTTCTCTGATACTCAAA ACAAAAGCTCAAAAAGCACTTTTACAACAGCAAGTTATTTCTGGTGCTAATGATGAGGAAAAAACCATTGCTCTGCACAC GCTATTACTGCGGGATCTTATGCTTGGTGATTATCAGGGTTATGAGCAGGATAAACAGTTAAGCCCTCATATTCAGCAAT CCGTCGATCAAAAAAGCTTTGCCGATGTAGACCTGGCGGCGTTCGATTGGCAGGGCGATAATGTGGAGCAGGGCTATGCC TGTGCTGCGTTAGATGGGACGGTAAAAGCATTGGTTAAAAATAAAACGGATGGTCATGCCCTCAACTGCTTGGGAGAATT CTTCCGTGTAACTGACATCAATATCAATACTTATCAGGAAGGGGAGGGCAATGAGGTGCTGAATGTCGCAGTCCATGCAC ATGAAACAGTGATAACTCAGCCCAATCGTTTCGATTATTATCAACACGTTATCAACGACCCGAAGGCGGAGCCAGAAGAT AAAAGCTATGCGCTTTACCGGGCTGTTATGTGCTATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATGTCGATAT TGCAACACGTAAGCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGTAGCCGATGGGCAGAACGGCTCAACTATTACT GGTAA
Upstream 100 bases:
>100_bases GTTACCGCGCTGCTAGAGGGTGCCAATCAAACCAGAGATTAATCGGTACACTAAATTTGGCCAGATGAATATACATATCT AACATCATCGCTTTCAGCTC
Downstream 100 bases:
>100_bases GCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCC CATGATTATCAGGCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 774; Mature: 774
Protein sequence:
>774_residues MINGMFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKY CPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFD KMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNI VPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAAR QALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFIS DMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPA TDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILK TKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYA CAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPED KSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Sequences:
>Translated_774_residues MINGMFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKY CPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFD KMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNI VPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAAR QALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFIS DMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPA TDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILK TKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYA CAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPED KSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW >Mature_774_residues MINGMFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKY CPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFD KMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNI VPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAAR QALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFIS DMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPA TDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILK TKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYA CAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPED KSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87263; Mature: 87263
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGMFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLG CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECHHHHHHHHHHHHH MAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADI CCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHH TRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARY HCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHH REARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNI HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC VPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESST CCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC NASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLA CCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC RQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPA CCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCC TDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEE AIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC YEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHA CCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCHH LNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPED HHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCC KSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure MINGMFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLG CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECHHHHHHHHHHHHH MAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADI CCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHH TRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARY HCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHH REARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNI HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC VPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESST CCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC NASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLA CCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC RQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPA CCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCC TDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEE AIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC YEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHA CCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCHH LNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPED HHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCC KSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA