| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yqjI [H]
Identifier: 218928039
GI number: 218928039
Start: 952033
End: 952713
Strand: Direct
Name: yqjI [H]
Synonym: YPO0864
Alternate gene names: 218928039
Gene position: 952033-952713 (Clockwise)
Preceding gene: 218928038
Following gene: 218928040
Centisome position: 20.46
GC content: 51.1
Gene sequence:
>681_bases ATGTTTGGTCATTCAAAACACGATCATCGTCATGGTGGTCATCGCCATGAAGGACAGGGCCACTGCGGTGAAAAAATGCG TCGCGGTGGTCGCCATAATGTGATGGCAGAAGATGCAGAATCGGCAAGAGGCGGCAAACATGGGCGCGGGCGTGGCGGTA AAATGCATCGCCTGTTCGAACATGGGGATTTACGCGTGGTACTGCTGGCGCTACTGAATAAAACCCCCAGCCACGGCTAT GAGCTGATTAAGGCTATTGAAGAAGCGTCATCAGGTCTATATGTGCCAAGCCCTGGGGTTATCTATCCAACACTGACACT GTTGGAAGAGCAGGATTTTGTCACCCCCGTAGCCACGGGTAATGGCCGCAAAAGTTACCAAATTACTGACGCTGGGAAGT TTGAACTACAGAAAAACCAAGCTATGGTCGATGTAATCTTTGCTCGTCTGGCGCAGGTAAACCGTCACAAAGAGGGGAAT CTGGCTGAAGGTATTGCCGATGCAATGCACCGCTTACGCCACATTCTACGTAGCAATATGATGCGTGCGGATCTCACGCC AGAACAAGTAGCGCGTATTAATACGGCGCTACTGGCTGCGGTAGACACCATTGAAGAAGAGTTGCAACCGGTTGGGGTGC AACCTGCGGCAGTTGATACCACTGTACAGGAGAAAAACTGA
Upstream 100 bases:
>100_bases CGTTGCGCAGTAACGCGTTTTAGATATATCTTTTTTTTATTTCTTTCTTGCCAATTTAGATATATCGGTATAGTTTAGAT ATATCTAAAGGAGATTTACA
Downstream 100 bases:
>100_bases TGCCCGGCTATCGTTATCGAATCACTATTGAACCCTTGACTGACCGTAAGGGCGAAGCCATTGATAAAGCCCCTGTCACC TTTGAAGCCGAGAATCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN
Sequences:
>Translated_226_residues MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN >Mature_226_residues MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789452, Length=142, Percent_Identity=35.2112676056338, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 24937; Mature: 24937
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH HGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATG CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECC NGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNM CCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC MRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH HGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATG CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECC NGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNM CCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC MRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]