| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928040
Identifier: 218928040
GI number: 218928040
Start: 952713
End: 953033
Strand: Direct
Name: 218928040
Synonym: YPO0865
Alternate gene names: NA
Gene position: 952713-953033 (Clockwise)
Preceding gene: 218928039
Following gene: 218928050
Centisome position: 20.47
GC content: 49.53
Gene sequence:
>321_bases ATGCCCGGCTATCGTTATCGAATCACTATTGAACCCTTGACTGACCGTAAGGGCGAAGCCATTGATAAAGCCCCTGTCAC CTTTGAAGCCGAGAATCATGACGAGATCCTCAGCATCATCGAACGGTTACAGGCCCGTGAAGATCTGGGCTTTGGCCAGG AGAAAACTGCCGCCTTTGCCTTAGGTTTGAAGCTGTTCTCGGAAACCATGATGGAGAATCGTAAGCATCCGCTATTTGAG CCGCTGCGCGGTGCATTTAAAGACTTTATGATCCTACTGAAGAAAGGTTCACCGCGTGACCGTAGTGATCATGCAGAATA G
Upstream 100 bases:
>100_bases ATACGGCGCTACTGGCTGCGGTAGACACCATTGAAGAAGAGTTGCAACCGGTTGGGGTGCAACCTGCGGCAGTTGATACC ACTGTACAGGAGAAAAACTG
Downstream 100 bases:
>100_bases CCGCTCTTGATAAGAGATCGGCTAAGTTTGGGGTTAAGCTCGTCGCTGAGCCGTCAAGAAAACCACTGGTTAGCCGCCAT CATCACCGCATAGCGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPGYRYRITIEPLTDRKGEAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFE PLRGAFKDFMILLKKGSPRDRSDHAE
Sequences:
>Translated_106_residues MPGYRYRITIEPLTDRKGEAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFE PLRGAFKDFMILLKKGSPRDRSDHAE >Mature_105_residues PGYRYRITIEPLTDRKGEAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFEP LRGAFKDFMILLKKGSPRDRSDHAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12193; Mature: 12062
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGYRYRITIEPLTDRKGEAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFA CCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGLKLFSETMMENRKHPLFEPLRGAFKDFMILLKKGSPRDRSDHAE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PGYRYRITIEPLTDRKGEAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFA CCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGLKLFSETMMENRKHPLFEPLRGAFKDFMILLKKGSPRDRSDHAE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA