The gene/protein map for NC_003143 is currently unavailable.
Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218927997

Identifier: 218927997

GI number: 218927997

Start: 896258

End: 896674

Strand: Reverse

Name: 218927997

Synonym: YPO0818

Alternate gene names: NA

Gene position: 896674-896258 (Counterclockwise)

Preceding gene: 218927998

Following gene: 218927996

Centisome position: 19.27

GC content: 29.26

Gene sequence:

>417_bases
ATGTATGTTGATACGGTTTCTGTTGTCTCTGGTAGTAAATTCATTGATATCAATGGTAAAGGAGTCATTGATTATGAAAA
AGAGATGTCTTTGGATTGCTGTATGAATAAAATCCATTTTCACACGAGAAAAGTTAGCATTGATATTAATGAGAAACAAA
AAAGACTGGTTATGTGTTTGTTTAACGATGTAAATAGAAAGCAAGATATTATAAAAGTAGTCTGGTACGAAAACCATAAA
AGTATTTCAGATAATAACTACCACCAATTAATTCATAAGTTTAGAGTGCATTTGAAAAGTTTTGGGATACCTGAAGGCAT
TATTAAAACAATAAATAGATATGGAATTAGACTTGATCCGAGTTTATTAATAACAGTTATGTCCACTAAGATGAATGAGA
GATTTAGTGGTTATTAA

Upstream 100 bases:

>100_bases
TTATTCATTGAGTGACAACGATAATAAACACGTATTTCCTTATCACATCTTTAACGTGATCGGTTGTTATAAATTTAATG
AATAATTTTAAGGGTTATCT

Downstream 100 bases:

>100_bases
TAAATAATACTCACCAGATTTTTTCATTATTATATGTTTGCTATCATTATTTATAATGAGGTTTTTTTTGTTAAAGATAA
GACTAAAAAATCCTTTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK
SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY

Sequences:

>Translated_138_residues
MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK
SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY
>Mature_138_residues
MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK
SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16172; Mature: 16172

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCL
CCEEEEEEECCCEEEEECCCEEEEHHHHCCHHHHHHHHHEEEEEEEEEECCCHHHEEEEE
FNDVNRKQDIIKVVWYENHKSISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDP
HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECH
SLLITVMSTKMNERFSGY
HHEEEEHHHHHCHHCCCC
>Mature Secondary Structure
MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCL
CCEEEEEEECCCEEEEECCCEEEEHHHHCCHHHHHHHHHEEEEEEEEEECCCHHHEEEEE
FNDVNRKQDIIKVVWYENHKSISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDP
HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECH
SLLITVMSTKMNERFSGY
HHEEEEHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA