Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927996
Identifier: 218927996
GI number: 218927996
Start: 895687
End: 896190
Strand: Reverse
Name: 218927996
Synonym: YPO0817
Alternate gene names: NA
Gene position: 896190-895687 (Counterclockwise)
Preceding gene: 218927997
Following gene: 218927995
Centisome position: 19.26
GC content: 28.77
Gene sequence:
>504_bases TTGTTAAAGATAAGACTAAAAAATCCTTTTAGGACACTCAACTGTAATCAATTTATATTTATTGAATTGAGTATTGTATT TCTAGTTGCATTTCATACAGTGATGGTTTTTTGGTCAATTATTTATAATGATAGCAATGATATGTTTATCTTGTACGATG GGCAGTCCTACGATAGTCAAAATTCTACCGAAAAGGCTAAGGTAATAGACAGTAGTAACTTATCGAAAATGTTTGATCGT AAAATAAACAAACCAGATAAAAAAATAGAAATGAATGATGTTCTTTTTTATTCTCCAGAATATATAGGGGAAATAAAACT GGTTGGCGTAATTGAACACTCAGCACCATCAGAGTCCATTGCAATATTGGAAGTAAAGGGAAAGCAAACAACACATTTAA CAAGGGAGAATATAAATTATGAAGATATAGTAATAGTGAAGATATTTACTGATAGAGTGATTATCAAGCGTAATGGTAAA TATTATTCATTAATAATTAACTAA
Upstream 100 bases:
>100_bases ACTAAGATGAATGAGAGATTTAGTGGTTATTAATAAATAATACTCACCAGATTTTTTCATTATTATATGTTTGCTATCAT TATTTATAATGAGGTTTTTT
Downstream 100 bases:
>100_bases TGGGTTATTTAAAATGTTTTTTACTTTATCTGGTCAGAGCGTAGCCTTATCAATCCATCTAAAATAAATGGTGTAACATC ATGTATATTAGTGGCAAAGG
Product: general secretion pathway protein C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLKIRLKNPFRTLNCNQFIFIELSIVFLVAFHTVMVFWSIIYNDSNDMFILYDGQSYDSQNSTEKAKVIDSSNLSKMFDR KINKPDKKIEMNDVLFYSPEYIGEIKLVGVIEHSAPSESIAILEVKGKQTTHLTRENINYEDIVIVKIFTDRVIIKRNGK YYSLIIN
Sequences:
>Translated_167_residues MLKIRLKNPFRTLNCNQFIFIELSIVFLVAFHTVMVFWSIIYNDSNDMFILYDGQSYDSQNSTEKAKVIDSSNLSKMFDR KINKPDKKIEMNDVLFYSPEYIGEIKLVGVIEHSAPSESIAILEVKGKQTTHLTRENINYEDIVIVKIFTDRVIIKRNGK YYSLIIN >Mature_167_residues MLKIRLKNPFRTLNCNQFIFIELSIVFLVAFHTVMVFWSIIYNDSNDMFILYDGQSYDSQNSTEKAKVIDSSNLSKMFDR KINKPDKKIEMNDVLFYSPEYIGEIKLVGVIEHSAPSESIAILEVKGKQTTHLTRENINYEDIVIVKIFTDRVIIKRNGK YYSLIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19485; Mature: 19485
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIRLKNPFRTLNCNQFIFIELSIVFLVAFHTVMVFWSIIYNDSNDMFILYDGQSYDSQ CEEEEECCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCC NSTEKAKVIDSSNLSKMFDRKINKPDKKIEMNDVLFYSPEYIGEIKLVGVIEHSAPSESI CCCCEEEEECCCCHHHHHHHHCCCCCCEEEECEEEEECCCCCCEEEEEEEEECCCCCCCE AILEVKGKQTTHLTRENINYEDIVIVKIFTDRVIIKRNGKYYSLIIN EEEEECCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCEEEEEEC >Mature Secondary Structure MLKIRLKNPFRTLNCNQFIFIELSIVFLVAFHTVMVFWSIIYNDSNDMFILYDGQSYDSQ CEEEEECCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCC NSTEKAKVIDSSNLSKMFDRKINKPDKKIEMNDVLFYSPEYIGEIKLVGVIEHSAPSESI CCCCEEEEECCCCHHHHHHHHCCCCCCEEEECEEEEECCCCCCEEEEEEEEECCCCCCCE AILEVKGKQTTHLTRENINYEDIVIVKIFTDRVIIKRNGKYYSLIIN EEEEECCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA