Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is exeL [H]
Identifier: 218927988
GI number: 218927988
Start: 886874
End: 888043
Strand: Reverse
Name: exeL [H]
Synonym: YPO0808
Alternate gene names: 218927988
Gene position: 888043-886874 (Counterclockwise)
Preceding gene: 218927989
Following gene: 218927987
Centisome position: 19.08
GC content: 31.79
Gene sequence:
>1170_bases GTGAAATTAACCTTCACACTCCTTATTCGACTAGGAGAAACAGAATTTGAACCTATCTATTGGTATGTTGAATCACAGGG AAAGAAATTAGTCAGACATGGAAAAATTAATGGAGTCGCTGAGTTAAAAAATATAACTTTATATGCTAATAATGTTGTCA AGATTTTGGTCCCCGCAAATAAAATCATTTTCAGAAGCTTAAGTATTAAGAAAAATGAAGTGATGAATAATATAAAATCG ATAGCCTTCTCGATTGAACAGTCTATTTCTAGTGATATAGATAATTTTCATATTGTGATATTAGATCAAGATAAAGACTT TTGCCATGTTGCTGCTATTGAACATGAATTGATGAATCGTTGGTTGTTCTGGTTAAACATAAATGGGATATCAGCATGTT GCATAATGCCAGACGCTTTTGCTCTGCCCTTTTTTAACAGTGAATGGAGTGTTATAAAAATTGAGAGTAACTGGTTGGTT AGAAATAATGAAATGTCTGGTTTTTTAGTTAATTCGAGTGTTTTGGAAAACATACTTATGTTAGCGGAACCCACCATTAA AGTTAATACTTTTAGTCCGACAGATATTAAATGGGGTAATTGGCAGTCGCTAGACTATAGTGATCCTGTATTAATTATGG CAAAAACTGTGAGTGGTAATCATGTTAATCTATTGAGTGGGAAATATAAATATGCTGAAAGAATAATAGTTAACAATAGT GTTTTTTTGCGTGTTGCCAGTTGGTTTTTTCTCTTGTTTTTAGTAATGAGTTTAAATGGTTGGTATCAAGGTTACAAAAT AGTCAGGGATACAGGGGCCTTAAGTAAGGTAGCACAAGATTTTTATGCTGATTTTTTACCCCCCGCATATCATGGTGGGG ATGTTAATACGAGCTTCAATAAATATATTTCAGATCTGGATCTTAAAAAAAACAATGTCAGTTTCATTAAATTATTAAAT GCTGTAAGTTATTATACAGCTGATGAAAATGTAGATGTACGTAGTTTTAATTTCAATTATTCTGATGGTGAAATATCTTT TGATATTGAAGGTGATGATGATTTAATAAATGAAATGCTAAATGATAAAACTAATCTATTTAATGCCAGGGTTGAGGTGA TTCGTTCTGGAGAAGACAAATATAATATCAAACTAAGCAGCCAACCATGA
Upstream 100 bases:
>100_bases GATAGTTATTATCAACTGATTACTTTTATCCATGCTGTAGGTAAGTCAATAGCTATTTTAAACCGGAGATACAGTTTTAG TGAGCAACATCATTGATGAC
Downstream 100 bases:
>100_bases GTTACGTCATGTTTTTACAGCATTTATTTTCTGCAAAGAGAAGAGTGCTACTACTTTATCTGCTTGTTATCTCTATTCCT ATCGTGTATTACATTACCAG
Product: general secretion pathway protein L
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLNINGISACCIMPDAFALPFFNSEWSVIKIESNWLV RNNEMSGFLVNSSVLENILMLAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNS VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP
Sequences:
>Translated_389_residues MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLNINGISACCIMPDAFALPFFNSEWSVIKIESNWLV RNNEMSGFLVNSSVLENILMLAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNS VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP >Mature_389_residues MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLNINGISACCIMPDAFALPFFNSEWSVIKIESNWLV RNNEMSGFLVNSSVLENILMLAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNS VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3297
COG function: function code U; Type II secretory pathway, component PulL
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP L family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007812 [H]
Pfam domain/function: PF05134 GspL [H]
EC number: NA
Molecular weight: Translated: 44515; Mature: 44515
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPAN CEEEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCEEEEEECCC KIIFRSLSIKKNEVMNNIKSIAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHCC WLFWLNINGISACCIMPDAFALPFFNSEWSVIKIESNWLVRNNEMSGFLVNSSVLENILM EEEEEEECCEEEEEECCCCEECCEECCCCCEEEEECCEEEECCCCCEEEECHHHHHHHHH LAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNS HCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHEEEEEECCH VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH KYISDLDLKKNNVSFIKLLNAVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEML HHHHHCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHH NDKTNLFNARVEVIRSGEDKYNIKLSSQP CCHHHHHHHEEEEEECCCCEEEEEECCCC >Mature Secondary Structure MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPAN CEEEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCEEEEEECCC KIIFRSLSIKKNEVMNNIKSIAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHCC WLFWLNINGISACCIMPDAFALPFFNSEWSVIKIESNWLVRNNEMSGFLVNSSVLENILM EEEEEEECCEEEEEECCCCEECCEECCCCCEEEEECCEEEECCCCCEEEECHHHHHHHHH LAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNS HCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHEEEEEECCH VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH KYISDLDLKKNNVSFIKLLNAVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEML HHHHHCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHH NDKTNLFNARVEVIRSGEDKYNIKLSSQP CCHHHHHHHEEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]