Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927987
Identifier: 218927987
GI number: 218927987
Start: 886416
End: 886877
Strand: Reverse
Name: 218927987
Synonym: YPO0807
Alternate gene names: NA
Gene position: 886877-886416 (Counterclockwise)
Preceding gene: 218927988
Following gene: 218927986
Centisome position: 19.06
GC content: 28.14
Gene sequence:
>462_bases ATGAGTTACGTCATGTTTTTACAGCATTTATTTTCTGCAAAGAGAAGAGTGCTACTACTTTATCTGCTTGTTATCTCTAT TCCTATCGTGTATTACATTACCAGTAGAGTAATTGAAGTAAGAAATAACAAACTGTTAATAAAATATAGTGAGCTAAGTT ATCATCTTCAGCAACACTCTATCATGGCGAAAAAATCAAACATAAAAAGCCATAAAAAGAGTGATCCTATCGATATTGAA ATAAATAAATCATTTAAAAATAAAAATATAATATTTACTGTCTCCTTACTTGATGGTGGTAAATGTTTTGTGGAAATAAA TTCAGCTAAATTCTCAAATTTACTTGATGCTATCATTGATGTGTCAAATAAATATGATATTAATGTATCTAGTGCTGATA TATACCTTCACCAAGATGATGATGATGGGTATGTTGCAGGAAAAATTATATTCTTTAAATGA
Upstream 100 bases:
>100_bases TAAATGAAATGCTAAATGATAAAACTAATCTATTTAATGCCAGGGTTGAGGTGATTCGTTCTGGAGAAGACAAATATAAT ATCAAACTAAGCAGCCAACC
Downstream 100 bases:
>100_bases ACCACTCGGTCTGATAGAGGTAAACATGATGGATATACAGGTTTTTTTTGTGAGCTATTTAATTTTTGGGGCCATGGTAG GCAGCTTTCTTAATGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIE INKSFKNKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDINVSSADIYLHQDDDDGYVAGKIIFFK
Sequences:
>Translated_153_residues MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIE INKSFKNKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDINVSSADIYLHQDDDDGYVAGKIIFFK >Mature_152_residues SYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIEI NKSFKNKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDINVSSADIYLHQDDDDGYVAGKIIFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17654; Mature: 17523
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHH IMAKKSNIKSHKKSDPIDIEINKSFKNKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIID HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHC VSNKYDINVSSADIYLHQDDDDGYVAGKIIFFK CCCCEEEEECCEEEEEEECCCCCEEEEEEEEEC >Mature Secondary Structure SYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHH IMAKKSNIKSHKKSDPIDIEINKSFKNKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIID HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHC VSNKYDINVSSADIYLHQDDDDGYVAGKIIFFK CCCCEEEEECCEEEEEEECCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA